Job Description P25549 Confidence 100.00% Date Thu Jan 5 11:42:06 GMT 2012 Rank 13 Aligned Residues 317 % Identity 15% Template c3m8yC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:phosphopentomutase; PDBTitle: phosphopentomutase from bacillus cereus after glucose-1,6-bisphosphate2 activation Resolution 2.10 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																		.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	P	N	V	V	V	F	L	L	D	D	V	G	W	M	.	.	.	D	V	G	F	N	G	G	G	V	A	.	.	.	.	.	.	.	.	.	.	V	G	N	P	T	P	D	I	D	A	V	A	S	Q	G	L	I	L	T	S	A	Y	S	Q	P	S	S	S	P	T	R	A	T	I	L	T	G	Q	Y	S	I
Query Conservation																		.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.											.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		K	Y	K	R	I	F	L	V	V	M	D	S	V	G	I	G	E	A	P	D	A	E	Q	F	G	D	L	G	S	D	T	I	G	H	I	A	E	H	M	N	G	L	Q	M	P	N	M	V	K	L	G	L	G	N	I	R	E	M	K	.	.	.	.	G	I	S	K	V	E	K	P	L	G	Y	Y	T	K	M	Q	E
Template Known Secondary structure				S								T	T				S	B		T	T	T	T	T	T	T		T	T												T	S										T							B	T	.	.	.	.	T	B				S	S		S	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		151													.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																										190	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	.	.	.	.	.	.	.	.	.	.	.	.	H	G	I	L	M	P	P	M	Y	G	Q	P	G	G	L	Q	G	L	T	T	L	P	Q	L	L	H	D	Q	G	Y	V	T	Q	A	I	G	K	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	M	G	E
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	T	G	K	D	M	T	G	H	W	E	I	M	G	L	Y	I	D	T	P	F	Q	V	F	P	E	G	F	P	K	E	L	L	D	E	L	E	E	K	T	G	R	K	I	I	G	N	K	P	A	S	G	T	E	I	L	D	E	L	G	Q	E	Q	M	E	T	G	S	L	I	V	Y	T	S	A	D	S	V	L
Template Known Secondary structure			S	S											T	T					S						T	T															S																																		S	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	E	S	Q	P	Q	N	V	G	F	D	D	F	R	G	F	N	S	V	S	D	M	Y	T	E	W	R	D	V	H	V	N	P	E	V	A	L	S	P	D	R	S	E	Y	I	K	Q	L	P	F	S	K	D	D	V	H	A	V	R	G	G	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	A	A	H	E	E	V	V	P	L	D	E	L	Y	K	I	C	K	I	A	R	E	L	T	L	D	E	K	Y	M	V	G	R	V	I	A	R	P	F	V	G	E	P	G	N	F	T	R	T	P	N	R	H	D	Y	A	L	K	P	F	G	R	T	V	M	N	E	L	K	D	S	D	Y	D	V	I	A	I	G
Template Known Secondary structure							T	T	T	S																T	T	S	G	G	G			S											T	T						S										S	S										T	T							T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
							258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	Q	A	I	A	D	I	T	P	K	Y	M	E	D	L	D	Q	R	W	M	D	Y	G	V	K	F	L	D	K	M	A	K	S	D	K	P	F	F	L	Y	Y	G	T	R	G	C	H	F	D	N	Y	P	N	A	K	Y	A	G	S	S	P	A	R	T	S	Y	G	D	C	M	V	E	M	N	D	V
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																											.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		K	I	S	D	I	Y	D	G	E	G	V	T	E	S	L	R	T	K	S	N	M	D	G	M	D	K	L	V	D	T	L	.	.	.	.	N	M	D	F	T	G	L	S	F	L	N	L	V	D	F	D	A	L	F	.	.	.	.	.	.	.	G	H	R	R	D	P	Q	G	Y	G	E	A	L	Q	E	Y	D	A	R
Template Known Secondary structure		T					T	T	T	T	T		S						S	S													.	.	.	.	T	S																T	T	.	.	.	.	.	.	.	T	T	T	T														T	T
Template Predicted Secondary structure																																	.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.								290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		F	A	N	L	Y	K	T	L	E	K	N	G	Q	L	D	N	T	L	I	V	F	T	S	D	N	G	P	E	A	E	V	P	P	H	G	R	T	P	F	R	G	A	K	G	S	T	W	E	G	G	V	R	V	P	T	F	V	Y	W	K	G	M	I	Q	P	R	.	K	S	D	G	I	V	D	L	A	D	L	F	P
Query Conservation																																																																				.
Alig confidence											.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation											.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	E	V	F	A	K	L	K	.	.	.	.	.	E	D	D	L	L	L	I	T	A	D	H	G	N	D	.	.	.	.	.	.	.	.	.	.	.	.	P	I	H	P	G	T	D	H	T	R	E	Y	V	P	L	L	A	Y	S	P	S	M	K	E	G	G	Q	E	L	P	L	R	Q	T	F	A	D	I	G	A
Template Known Secondary structure											.	.	.	.	.	T	T								S	S	B			.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	S	S	S		B		B									T	T		T	T				B				B	S	S	T
Template Predicted Secondary structure											.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.						.	.	320	.	.	.	.	.	.	.	.	.	330	.													.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	L	D	L	A	G	H	P	G	A	K	V	A	N	L	V	P	K	T	T	F	I	D	G	V	D	Q	T	S	F	F
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	A	E	N	F	G	V	K	M	P	.	.	.	.	.	.	.	.	.	.	.	E	Y	G	T	S	F	L	N	E	L
Template Known Secondary structure								T					.	.	.	.	.	.	.	.	.	.	.	S	S					S	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.												.	.	.	.	.	.	.	390	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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