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Job DescriptionP25549
Confidence98.97%DateThu Jan 5 11:42:06 GMT 2012
Rank33Aligned Residues309
% Identity19%Templatec2x98A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alkaline phosphatase; PDBTitle: h.salinarum alkaline phosphatase
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   82.......90.........100..... ....110.........120.........130.. .......140
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Query Sequence  TGKKPNVVVFLLDDVGWMDVGFNG. . . . . . . . . . . . . . . . . GGVAVGNPTPDIDAVASQGLILTSAYS. . . . QPSSSPTR
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Template Sequence  ASPAANAIAYIVDGMGQTQISAARYLNAYKTAPERFPLNVSPAET. . . . PTGFDAFSSRGSMTTFPDDPYETTTDSAAAA
Template Known Secondary structure 

S
S


TTTTTGGGSTTTS....

TGGGSS




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   44.....50.........60.........70.........80........ .90.........100.........110.........
 
   141........150.........160...... ...170.........180.........190..... ....
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Query Sequence  ATILTGQYSIHHGILMPPMYGQPGGL. . . QGLTTLPQLLHDQGYVTQAIGKWHMGENK. . . . . . . . . . . . . . . . . . ESQP
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Template Sequence  TAFASG. . . . . VKTYNGAIGGVQTSGGGFQRVDTVLERASAQGYATGLITTTEATHATPAAFAAHVEDRGNQTEIARQYI
Template Known Secondary structure  S.....



TT
BSTTT


T
TTS

BSSTT
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   120..... ....130.........140.........150.........160.........170.........180.........190....
 
   200......... 210.........220.........230.........240.........250. ........260.........270...
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Query Sequence  QNVGFDDFRG. . . . . FNSVSDMYTEWRDVHVNPEVALSPDRSEYIKQLPFSKDDVHA. VRGGEQQAIADITPKYMEDLDQ
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Template Sequence  EETQPDVILGGQRRDFEADASNGGTLVDAARDNGYTIAETAAELDAVDDPPVLGLFSQESHLDYYLDRKNDPENTQPNLD
Template Known Secondary structure  TT

S
GGGGGSB
SSSSBTT

S

SS


SSS




TT




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   195....200.........210.........220.........230.........240.........250.........260.........270....
 
   274.....280.........290.........300.........310.........320.........330.........340.........350...
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Query Sequence  RWMDYGVKFLDKMAKSDKPFFLYYGTRGCHFDNYPNAKYAGSSPARTSYGDCMVEMNDVFANLYKTLEKNGQLDNTLIVF
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Template Sequence  AMVDAGVDLLSSAGDPDKGFFLLVESGRV. . . . . . . . DHAGHANYPAQVAEQY. EATQVAGQLVEYAETTA. . EPTFLVS
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SS
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S........T
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S..S
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   275....280.........290.........300... ......310......... 320.........330...... ...340...
 
   354.....360.........370.........380.
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Query Sequence  TSDNGPEAEVPPHGRTPFRGAKGSTWEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TGDHE. . . . . . . CGGLTLGRDSPYEVEYDVLAAQKATTSRLRDLLAGVRSADELESIVAAHTGITALTDREVAKLRDAPG
Template Known Secondary structure  .......S

BSS
SS
S




S
TT


SS





GG
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   344.... .350.........360.........370.........380.........390.........400.........410......
 
   382.......390.........400.........410.........420
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Query Sequence  . . . . . . . . . . . . . . . . . . . . GVRVPTFVYWKGMIQPRKSDGIVDLADLFPTALDLAGHP
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Template Sequence  SISTILAERAGIAFTTDGHTGTDVPVFAHGPN. . . AARFDAARDNTAVADALAAALGVS
Template Known Secondary structure  GT
B


SS


STT...GGGGSSTTT

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   417..420.........430.........440........ .450.........460.........470..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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