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Job DescriptionP25549
Confidence100.00%DateThu Jan 5 11:42:06 GMT 2012
Rank6Aligned Residues414
% Identity23%Templatec2qzuA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative sulfatase yidj; PDBTitle: crystal structure of the putative sulfatase yidj from bacteroides2 fragilis. northeast structural genomics consortium target bfr123
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.........120.........130... ......140.........150........
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Query Sequence  KKTGKKPNVVVFLLDDVGWMDVGFNGGGVAVGNPTPDIDAVASQGLILTSAYSQ. PSSSPTRATILTGQYSIHHGILMPP
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Template Sequence  QEKQPTPNLVFIXADQYRGDAIGCIGKEPV. . . KTPHLDKLASEGINFTNAISSYPVSSPARGXLXTGXYPIGSKVTGNC
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SS
TT

TT

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TSTT
B
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   22.......30.........40.........50. ........60.........70.........80.........90........
 
   159160.... .....170.........180.........190.........200.........210.........220.........230....
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Query Sequence  MYGQPG. . . . GLQGLTTLPQLLHDQGYVTQAIGKWHMGENKESQPQNVGFDDFRGFNSVSDMYTEWRDVHVNPEVALSPD
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Template Sequence  NSETAPYGVELSQNARCWSDVLKDQGYNXGYIGKWHLDAPYKPYVDTYNNRGKVAWNEWCPPERRHGFDHWIAYGTYDYH
Template Known Secondary structure  STTTGGGT
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TT


TT



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SS

SSGGGSSS







GGGSTT

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T
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   235....240.........250.........260.........270.........280.........290.........300.........310.
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Query Sequence  RSEYIKQLPFSKDDVHAVRGGEQQAIADITPKYMEDLDQRWMDYGVKFLDKMAKSDKPFFLYYGTRGCHFDNYPNAK. . .
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Template Sequence  LKPXYWNTTAPRDSFYYVN. . . . . . . . . . . . . . . QWGPEYEASKAIEYINGQKDQKQPFALVVSXNPPHTGYELVPDRYK
Template Known Secondary structure  TS
B
TT

TT


S...............S
TTTT
SS

TTSS
TT
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   179180.........190....... ..200.........210.........220.........230.........240...
 
   312.......320.........330.........340.........350.........360......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . YAGSSPARTSYGDCMVEMNDVFANLYKTLEKNGQLDNTLIVFTSDNGPEAEVPPH
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Template Sequence  EIYKDLDVEALCKGRPDIPAKGTEXGDYFRNNIRNYYACITGVDENVGRIIEALKQNNLFDNTIVVFTSDHGICXGAHEN
Template Known Secondary structure  TTTT

TTT
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TTSTT
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TTGGG
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   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   367..370.........380.........390........ .400.........410.........420.........430.........440.....
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Query Sequence  GRTPFRGAKGSTWEGGVRVPTFVYWKGMIQPR. KSDGIVDLADLFPTALDLAGHPGAKVANLVPKTTFIDGVDQTSFFLG
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Template Sequence  . . . . . . AGKDIFYEESXRIPXILSWPDQIKPRKSDPLXIAFADLYPTLLSXXGFSKEIPET. . . . . . . VQTFDLSNEVLT
Template Known Secondary structure  ......SS

SSSB


TTT






BGGGTT
GGGS
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   324.....330.........340.........350.........360.........370........ .380.........390
 
   446...450.........460... ......470.........480.........490.........500.........510.........520
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Query Sequence  TNGQSNRKAEHYFLNGKL. . . . . AAVRMDEFKYHVLIQQPYAYTQSGYQGGFTGTVMQTAGSSVFNLYTDPQESDSIGVR
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Template Sequence  GKNKKDLVQPYYFVKFDNHATGYRGLRTDRYTYAVHATDG. . . . . . . . . . . . . . . . . KIDNVILFDRTNDPHEXNNIASQ
Template Known Secondary structure 



TT


TT
TTS
SSTT.................TTT
TT




GGG
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   391........400.........410.........420.........430 .........440.........450...
 
   521........530.........540.
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Query Sequence  HIPMGVPLQTEMHAYMEILKK
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Template Sequence  QLKLTHTFNRQLKTWLEKTND
Template Known Secondary structure 
TT
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   454.....460.........470....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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