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Job DescriptionP25549
Confidence100.00%DateThu Jan 5 11:42:06 GMT 2012
Rank16Aligned Residues273
% Identity21%Templatec2gsoB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:phosphodiesterase-nucleotide pyrophosphatase; PDBTitle: structure of xac nucleotide2 pyrophosphatase/phosphodiesterase in complex with vanadate
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.........110.........120.........130... . .....140.........150.........160.
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Query Sequence  KPNVVVFLLDDVGWMDVGFNGGGVAVGNPTPDIDAVASQGLILTSAYSQ. P. SSSPTRATILTGQYSIHHGILMPPMYG.
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Template Sequence  PHALLLISIDGLRADMLDRG. . . . . . . . ITPNLSHLAREGVRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDP
Template Known Secondary structure 

TT

GGGGSSS........S
SS


SS
S


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SSST
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   45....50.........60.... .....70.........80.........90.........100.........110......
 
   162.......170.........180.........190.........200.........210.........220........
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Query Sequence  . . . . . . . . . . . . . QPGGLQGLTTLPQLLHDQGYVTQAIGKWHMGENKESQPQNVGFDDFRGFNSVSDMYTEWRDVHVNPE
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Template Sequence  TLGGFWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWSWPGSEAAIKGVRPSQWRHYQKGVR. . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
TT
T
GGG

S

TT
SS
TTTTS
BTTB

SB




TT

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   117..120.........130.........140.........150.........160.........170.........
 
   229230.........240.........250.........260.........270.........280.........290.........300........
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Query Sequence  VALSPDRSEYIKQLPFSKDDVHAVRGGEQQAIADITPKYMEDLDQRWMDYGVKFLDKMAKSDKPFFLYYGTRGCHFDNYP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LDTRVDAVRGWLATDGA. QRNRLVTLYFEHVDEAGHD
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GG.G

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   180.........190...... ...200.........210.....
 
   309310.........320.........330.........340.........350.........360
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Query Sequence  NAKYAGSSPARTSYGDCMVEMNDVFANLYKTLEKNGQLDNTLIVFTSDNGPE. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  HGPESRQYA. . . . . . DAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVAPGHAISVEDIAPPQIATAITDGQVI
Template Known Secondary structure 
TTS......T
GGG
S



TT
S
TTT


BS
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   216...220.... .....230.........240.........250.........260.........270.........280.........
 
   361........370.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AEVPPHGRTPFRGAKGSTW
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Template Sequence  GFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQMHEGWDALFPDKLAKRAQRGT. RGSHGYDPA
Template Known Secondary structure 
TT
STTGGGS
GGG

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STTS
S
TT

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TT
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   290.........300.........310.........320.........330.........340.........350......... 360........
 
   380.........390.........400.........410.........420.........430....... ..440....
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Query Sequence  EGGVRVPTFVYWKGMIQPRKSDGIVDLADLFPTALDLAGHPGAKVANLVPKTTFIDGV. . DQTSFFL
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Template Sequence  LPSMRAVFLAQGPD. LAQGKTLPGFDNVDVYALMSRLLGIPAAP. . . . . . . . . . NDGNPATLLPALR
Template Known Secondary structure  SGGG
B
STT.B
SS

GGGTT



S..........
SS
TTTTGGGB
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   369370.........380.. .......390.........400.........410. ........420....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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