Job Description P0AFX9 Confidence 97.09% Date Thu Jan 5 11:27:32 GMT 2012 Rank 8 Aligned Residues 158 % Identity 16% Template d2byoa1 SCOP info LolA-like prokaryotic lipoproteins and lipoprotein localization factors Prokaryotic lipoproteins and lipoprotein localization factors LppX-like Resolution 2.15

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50				.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																					.										.	.	.			.
Query SS confidence																					.										.	.	.			.
Query Sequence		A	T	P	A	S	G	A	L	L	Q	Q	M	N	L	A	S	Q	S	L	.	N	Y	E	L	S	F	I	S	I	.	.	.	N	K	.	Q	G	V	E	S	L	R	Y	R	H	A	R	L	D	N	R	P	L	A	Q	L	L	Q	M	D	G	P	R	R	E	V	V	Q	R	G	N	E	I	S	Y	F	E	P	G	L
Query Conservation																					.										.	.	.			.
Alig confidence																					.										.	.	.			.
Template Conservation
Template Sequence		S	D	P	A	L	L	A	E	I	R	Q	S	L	D	A	T	K	G	L	T	S	V	H	V	A	V	R	T	T	G	K	V	D	S	L	L	G	I	T	S	A	D	V	D	V	R	A	N	P	L	A	A	K	G	V	C	T	Y	N	D	E	Q	G	V	P	F	R	V	Q	G	D	N	I	S	V	K	L	F	D	D
Template Known Secondary structure																			T		S														S	S	T	T										T	T	T	T									T	T										T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.																.
Query Sequence		E	P	F	T	L	N	G	D	Y	I	V	D	S	L	P	S	L	I	Y	T	D	F	K	R	L	S	P	Y	Y	D	F	I	S	V	G	R	T	R	I	A	D	R	L	C	E	V	I	R	V	V	A	.	.	.	.	.	.	.	.	.	.	R	D	G	T	R	Y	S	Y	I	V	W	M	D	T	E	.	S	K	L
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.																.
Alig confidence																				.	.	.	.																														.	.	.	.	.	.	.	.	.	.																.
Template Conservation																				.	.	.	.
Template Sequence		W	S	N	L	G	S	I	S	E	L	S	T	S	R	V	G	V	T	.	.	.	.	Q	L	L	S	G	V	T	N	L	Q	A	Q	G	T	E	V	I	D	G	I	S	T	T	K	I	T	G	T	I	P	A	S	S	V	K	M	L	D	P	G	A	K	S	A	R	P	A	T	V	W	I	A	Q	D	G	S	H	H
Template Known Secondary structure															T					.	.	.	.			S	T	T													T	T																				T	T			S										S	S	S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	R	V	D	L	L	D	R	D	G	E	T	L	E	Q	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	R	A	S	I	D	L	G	S	G	S	I	Q	L	T	Q	S
Template Known Secondary structure										S	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions