Job Description P0AFX9 Confidence 18.39% Date Thu Jan 5 11:27:32 GMT 2012 Rank 15 Aligned Residues 82 % Identity 15% Template d1f15a_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Bromoviridae-like VP Resolution 3.20

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.
Predicted Secondary structure																														.	.																																											.	.
Query SS confidence																														.	.																																											.	.
Query Sequence		F	R	V	I	A	F	N	V	N	Q	D	I	S	S	S	M	Q	T	L	A	K	A	N	L	P	P	L	L	.	.	S	V	P	V	G	E	K	A	K	F	S	W	T	P	T	W	L	P	Q	G	F	S	E	V	S	S	S	R	R	P	L	P	T	M	D	N	M	P	I	E	S	R	.	.	L	Y	S	D	G	L
Query Conservation																														.	.																																											.	.
Alig confidence																														.	.																																											.	.
Template Conservation
Template Sequence		Y	T	F	T	S	I	T	L	K	P	P	K	I	D	R	G	S	Y	Y	G	K	R	L	L	L	P	D	S	V	T	E	Y	D	K	K	L	V	S	R	L	Q	I	R	V	N	P	L	P	K	F	D	S	T	V	W	V	T	V	R	K	V	P	A	S	S	D	L	S	V	A	A	I	S	A	M	F	A	D	G	A
Template Known Secondary structure																T	T															T	T	T	T	S													T	T			S										T	T	T	S				S	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		259	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	F	S	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	V	L	V	Y
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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