Job Description P0AFX9 Confidence 98.11% Date Thu Jan 5 11:27:32 GMT 2012 Rank 7 Aligned Residues 162 % Identity 14% Template c3mhaB_ PDB info PDB header:lipid binding protein Chain: B: PDB Molecule:lipoprotein lprg; PDBTitle: crystal structure of lprg from mycobacterium tuberculosis bound to pim Resolution 1.85 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																			.										.	.	.																															.	.	.
Query SS confidence																			.										.	.	.																															.	.	.
Query Sequence		P	A	S	G	A	L	L	Q	Q	M	N	L	A	S	Q	S	L	.	N	Y	E	L	S	F	I	S	I	.	.	.	N	K	Q	G	V	E	S	L	R	Y	R	H	A	R	L	D	N	R	P	L	A	Q	L	L	Q	M	D	G	P	R	.	.	.	R	E	V	V	Q	R	G	N	E	I	S	Y	F	E	P	G	L
Query Conservation																			.										.	.	.																															.	.	.
Alig confidence																			.										.	.	.																															.	.	.
Template Conservation
Template Sequence		P	D	A	K	P	L	V	E	E	A	T	A	Q	T	K	A	L	K	S	A	H	M	V	L	T	V	N	G	K	I	P	G	L	S	L	K	T	L	S	G	D	L	T	T	N	P	T	A	A	T	G	N	V	K	L	T	L	G	G	S	D	I	D	A	D	F	V	V	F	D	G	I	L	Y	A	T	L	T	P	N
Template Known Secondary structure																	T												S			S	S												T	T	T	T											T	T											T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.													.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																								.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	F	T	L	N	G	D	Y	I	V	D	S	L	P	S	L	I	Y	T	D	F	.	.	.	K	R	L	S	P	Y	Y	D	F	I	S	V	G	R	T	R	I	A	D	R	L	C	E	V	I	R	V	V	A	.	.	.	.	.	.	.	.	.	.	.	.	R	D	G	T	R	Y	S	Y	I	V	W	M	D	T
Query Conservation																								.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	W	S	D	F	G	P	A	A	D	I	Y	D	P	A	Q	V	L	N	P	D	T	G	L	A	N	V	L	A	N	F	A	D	A	K	A	E	G	R	D	T	I	N	G	Q	N	T	I	R	I	S	G	K	V	S	A	Q	A	V	N	Q	I	A	P	P	F	N	A	T	Q	P	V	P	A	T	V	W	I	Q	E
Template Known Secondary structure									G	G	G	T			G	G	G	G	G		T	T	T	S							T													T	T																				T	T				S	S										S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		163		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		E	.	S	K	L	P	M	R	V	D	L	L	D	R	D	G	E	T	L	E	Q	F	R	V	I	A
Query Conservation			.
Alig confidence			.																		.
Template Conservation																					.
Template Sequence		T	G	D	H	Q	L	A	Q	A	Q	L	D	R	G	S	G	N	S	V	.	Q	M	T	L	S	K
Template Known Secondary structure		S	T	T											S	T	T				.
Template Predicted Secondary structure																					.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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