Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFX9
Confidence99.86%DateThu Jan 5 11:27:32 GMT 2012
Rank3Aligned Residues167
% Identity13%Templatec3bk5A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative outer membrane lipoprotein-sorting protein; PDBTitle: crystal structure of putative outer membrane lipoprotein-sorting2 protein domain from vibrio parahaemolyticus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40 .........50.........60....... ..70.........80.... ....
Predicted Secondary structure 




...







......





.....

Query SS confidence 

















. . .


























. . . . . .
















. . . . .



Query Sequence  ATPASGALLQQMNLASQS. . . LNYELSFISINKQGVESLRYRHARLDN. . . . . . RPLAQLLQMDGPRREVV. . . . . QRGN
Query Conservation     

 


  
  
   ... 

 
  
           
 
     ......   


  


   


.....  

Alig confidence 

















...


























......
















.....



Template Conservation   
  
 

         
                    
              
 
  
  
    

  
        
Template Sequence  NAEKGLEIAQERKARDEGWGDSIATXEXILKNAQESSTRLXRLKSLEVEGDGDKGLTIFDQPRDVTGTAFLNHSHTIGAD
Template Known Secondary structure 
TT










TTS

STTTTT


SSS

Template Predicted Secondary structure 





























Template SS confidence 















































































  
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions