Job Description P0AFX9 Confidence 98.39% Date Thu Jan 5 11:27:32 GMT 2012 Rank 6 Aligned Residues 147 % Identity 16% Template c2yzyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative uncharacterized protein ttha1012; PDBTitle: crystal structure of uncharacterized conserved protein from thermus2 thermophilus hb8 Resolution 1.60 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		P	A	S	G	A	L	L	Q	Q	M	N	L	A	S	Q	S	L	N	Y	E	L	S	F	I	S	I	N	K	Q	G	V	E	S	L	R	Y	R	H	A	R	L	D	N	R	P	L	A	Q	L	L	Q	M	D	G	P	.	.	.	R	R	E	V	V	Q	R	G	N	E	I	S	Y	F	E	P	G	L	E	P	F	T
Query Conservation																																																									.	.	.
Alig confidence																.														.	.	.																									.	.	.
Template Conservation																.														.	.	.
Template Sequence		Q	S	A	Q	E	I	L	D	R	V	E	K	N	L	.	S	T	P	W	Q	A	T	V	Q	G	R	I	E	.	.	.	E	E	L	L	A	R	V	Y	A	L	P	Q	A	R	L	F	R	V	E	F	L	K	P	G	S	L	E	G	N	F	T	V	I	T	E	K	E	V	W	N	Y	L	Y	L	T	N	Q	L	V
Template Known Secondary structure															T	.		S												.	.	.											G	G	G	T									S	T	T	T	T	T							S	S							T	T	T	T
Template Predicted Secondary structure																.														.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		L	N	G	D	Y	I	V	D	S	L	P	S	L	I	Y	T	D	F	K	R	L	S	P	Y	Y	D	F	I	S	V	G	R	T	R	.	I	A	D	R	L	C	E	V	I	R	V	V	A	R	D	G	T	R	Y	S	Y	I	V	W	M	D	T	E	S	K	L	P	M	R	V	D	L	L	D	R	D	G	E	T	L
Query Conservation																																				.
Alig confidence						.	.	.	.	.	.																									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	P	Q	.	.	.	.	.	.	V	D	L	R	L	E	G	E	V	R	L	P	E	G	M	A	W	K	L	V	G	R	S	Q	G	F	A	A	M	E	L	Y	I	L	K	A	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	L	R	F	V	F	L	D	E	K	G	K	V	L
Template Known Secondary structure						.	.	.	.	.	.												T	T														S								T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	F	R	V	I	A	F	N	V	N	Q	D	I	S	S	S	M	Q
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		A	D	L	K	V	V	E	F	K	.	R	T	N	L	T	E	A	Q	L
Template Known Secondary structure											.
Template Predicted Secondary structure											.
Template SS confidence
		185	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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