Job Description P0AFX9 Confidence 100.00% Date Thu Jan 5 11:27:32 GMT 2012 Rank 1 Aligned Residues 261 % Identity 101% Template c2v43A_ PDB info PDB header:regulator Chain: A: PDB Molecule:sigma-e factor regulatory protein rseb; PDBTitle: crystal structure of rseb: a sensor for periplasmic stress2 response in e. coli Resolution 2.37 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	A	L	L	Q	Q	M	N	L	A	S	Q	S	L	N	Y	E	L	S	F	I	S	I	N	K	Q	G	V	E	S	L	R	Y	R	H	A	R	L	D	N	R	P	L	A	Q	L	L	Q	M	D	G	P	R	R	E	V	V	Q	R	G	N	E	I	S	Y	F	E	P	G	L	E	P	F	T	L	N	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	G	A	L	L	Q	Q	M	N	L	A	S	Q	S	L	N	Y	E	L	S	F	I	S	I	N	K	Q	G	V	E	S	L	R	Y	R	H	A	R	L	D	N	R	P	L	A	Q	L	L	Q	M	D	G	P	R	R	E	V	V	Q	R	G	N	E	I	S	Y	F	E	P	G	L	E	P	F	T	L	N	G	D
Template Known Secondary structure																	S											T	T													T	T										S	S	S								T	T							T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	V	D	S	L	P	S	L	I	Y	T	D	F	K	R	L	S	P	Y	Y	D	F	I	S	V	G	R	T	R	I	A	D	R	L	C	E	V	I	R	V	V	A	R	D	G	T	R	Y	S	Y	I	V	W	M	D	T	E	S	K	L	P	M	R	V	D	L	L	D	R	D	G	E	T	L	E	Q	F	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	V	D	S	L	P	S	L	I	Y	T	D	F	K	R	L	S	P	Y	Y	D	F	I	S	V	G	R	T	R	I	A	D	R	L	C	E	V	I	R	V	V	A	R	D	G	T	R	Y	S	Y	I	V	W	M	D	T	E	S	K	L	P	M	R	V	D	L	L	D	R	D	G	E	T	L	E	Q	F	R	V
Template Known Secondary structure		S		T	T	S	S		G	G	G	G							T	T	T												T	T											T	T	S		S									T	T	T											T	T	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	F	N	V	N	Q	D	I	S	S	S	M	Q	T	L	A	K	A	N	L	P	P	L	L	S	V	P	V	G	E	K	A	K	F	S	W	T	P	T	W	L	P	Q	G	F	S	E	V	S	S	S	R	R	P	L	P	T	M	D	N	M	P	I	E	S	R	L	Y	S	D	G	L	F	S	F	S	V	N	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	F	N	V	N	Q	D	I	S	S	S	M	Q	T	L	A	K	A	N	L	P	P	.	.	.	.	.	.	.	.	.	.	.	.	S	W	T	P	T	W	L	P	Q	G	F	S	E	V	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	S	D	G	L	F	S	F	S	V	N	V
Template Known Secondary structure								S	S																.	.	.	.	.	.	.	.	.	.	.	.									T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.													.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																	.	.	.	.	.	230	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	A	T	P	S	S	T	D	Q	M	L	R	T	G	R	R	T	V	S	T	S	V	R	D	N	A	E	I	T	I	V	G	E	L	P	P	Q	T	A	K	R	I	A	E	N	I	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	A	T	P	S	S	T	D	Q	M	L	R	T	G	R	R	T	V	S	T	S	V	R	D	N	A	E	I	T	I	V	G	E	L	P	P	Q	T	A	K	R	I	A	E	N	I	K	F
Template Known Secondary structure						T	T									S	S									T	T								S												T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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