Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9J6
Confidence100.00%DateThu Jan 5 11:10:28 GMT 2012
Rank6Aligned Residues300
% Identity22%Templatec2rbcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sugar kinase; PDBTitle: crystal structure of a putative ribokinase from agrobacterium2 tumefaciens
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  AGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNID
Query Conservation     




   

        
               

   


  
  

     
  

 
  
  
   
    
 
Alig confidence 















































































Template Conservation   






   

    
   
  
            

   


  
  

     
  

 
  
  
   
   

 
Template Sequence  GKHVLCVGAAVLDTLFRVADXPKGEGKVLPYEVLQIAEGXASSAAYAVHRXGGRASLWGAVGDDETGTRILRDLSESGID
Template Known Secondary structure 

S


SS


SSS



S
TT

SSTT
Template Predicted Secondary structure 



























Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  ITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIV
Query Conservation                                                                                  
Alig confidence 































..













































Template Conservation             
                    ..                                            
 
Template Sequence  TSGXTVAPGARSALSTIIIDNRGERLIVPFYD. . HRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALGKPAI
Template Known Secondary structure 
TT
TT



TTS


..GGGGSS




TT
S
SSSTT

Template Predicted Secondary structure 













..



















Template SS confidence 















































































   87..90.........100.........110........ .120.........130.........140.........150.........160....
 
   164.....170.........180.........190.........200.........210.........220.........230...... ...240.
Predicted Secondary structure 




























..
Query SS confidence 








































































. .




Query Sequence  ALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGE. . GQRVP
Query Conservation                            
                     
       



 
  

       ..     
Alig confidence 


































....

































..




Template Conservation   
                
    
  
        ....                 



 
  
               
Template Sequence  LDGDVAPVETLEGLAPAATHIVFSEPAATRLTGLE. . . . TVKDXLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQT
Template Known Secondary structure 
S

GGG
S

S....SSTTS
GGG

TT



Template Predicted Secondary structure 
















....














Template SS confidence 















































































   165....170.........180.........190......... 200.........210.........220.........230.........240
 
   242.......250.........260.........270.........280.........290.........300.........
Predicted Secondary structure 

























Query SS confidence 



































































Query Sequence  GFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQR
Query Conservation 
    










 

 
  
  
     

  
   

      
     
    
   
    
Alig confidence 



































































Template Conservation       










 

    
  
     

  
   

  
   
     
    
        
Template Sequence  TXQVEAVDTLAAGDIFHGTFALAXAEGXQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAXRQWL
Template Known Secondary structure 





S

TTTT

TSSSGGGG


Template Predicted Secondary structure 
























Template SS confidence 



































































   241........250.........260.........270.........280.........290.........300........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions