Job Description P0A9J6 Confidence 100.00% Date Thu Jan 5 11:10:28 GMT 2012 Rank 9 Aligned Residues 297 % Identity 26% Template c2nwhA_ PDB info PDB header:signaling protein,transferase Chain: A: PDB Molecule:carbohydrate kinase; PDBTitle: carbohydrate kinase from agrobacterium tumefaciens Resolution 1.86 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	N	A	G	S	L	V	V	L	G	S	I	N	A	D	H	I	L	N	L	Q	S	F	P	T	P	G	E	T	V	T	G	N	H	Y	Q	V	A	F	G	G	K	G	A	N	Q	A	V	A	A	G	R	S	G	A	N	I	A	F	I	A	C	T	G	D	D	S	I	G	E	S	V	R	Q	Q	L	A	T	D
Query Conservation
Alig confidence					.	.	.																													.
Template Conservation					.	.	.																													.
Template Sequence		M	K	K	.	.	.	I	L	V	L	G	G	A	H	I	D	R	R	G	M	I	E	T	E	T	A	P	G	A	S	N	P	G	S	.	W	M	E	E	A	G	G	G	G	F	N	A	A	R	N	L	S	R	L	G	F	E	V	R	I	I	A	P	R	G	G	D	V	T	G	E	V	V	A	E	A	A	R	Q	A
Template Known Secondary structure					.	.	.					S											S	S	S			T	T	S						.																			T	T											S	S													T
Template Predicted Secondary structure					.	.	.																													.
Template SS confidence
		1	.	.				.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		N	I	D	I	T	P	V	S	V	I	K	G	E	S	T	G	V	A	L	I	F	V	N	G	E	G	E	N	V	I	G	I	H	A	G	A	N	A	A	L	S	P	A	L	V	.	.	E	A	Q	R	E	R	I	A	N	A	S	A	L	L	M	Q	L	E	S	P	L	E	S	V	M	A	A	A	K	I	A	H	Q
Query Conservation																																															.	.
Alig confidence																																															.	.
Template Conservation
Template Sequence		G	V	E	D	T	P	F	T	F	L	D	R	R	T	P	S	Y	T	A	I	L	E	R	D	G	N	L	V	I	A	L	A	D	M	D	L	Y	K	L	F	T	P	R	R	L	K	V	R	A	V	R	E	A	I	I	A	S	D	F	L	L	C	D	A	N	L	P	E	D	T	L	T	A	L	G	L	I	A	R	A
Template Known Secondary structure		T									T	T	S											T	T	S										G	G	G	G	G							T	S											S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		N	K	T	I	V	A	L	N	P	A	P	A	R	E	L	.	.	P	D	E	L	L	A	L	V	D	I	I	T	P	N	E	T	E	A	E	K	L	T	G	I	R	V	E	N	D	E	D	A	A	K	A	A	Q	V	L	H	E	K	G	I	R	T	V	L	I	T	L	G	S	R	G	V	W	A	S	V	N	G	E
Query Conservation																	.	.
Alig confidence																	.	.																											.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.
Template Sequence		C	E	K	P	L	A	A	I	A	I	S	P	A	K	A	V	K	L	K	A	A	L	G	D	I	D	I	L	F	M	N	E	A	E	A	R	A	L	T	G	V	R	D	.	.	.	.	.	.	.	.	W	P	N	I	L	R	K	A	G	L	S	G	G	V	V	T	R	G	A	S	E	V	V	A	F	N	G	T	E
Template Known Secondary structure		T	T									S					G	G	G	T	T	T	G	G	G		S																T	T	.	.	.	.	.	.	.	.								T	T									T	T	T							S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		237	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		G	Q	R	V	.	P	G	F	R	V	Q	A	V	D	T	I	A	A	G	D	T	F	N	G	A	L	I	T	A	L	L	E	E	K	P	L	P	E	A	I	R	F	A	H	A	A	A	A	I	A	V	T	R	K	G	A	Q	P	S	V	P	W	R	E	E	I	D	A	F	L	D	R	Q	R
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		K	A	I	L	H	P	P	L	I	R	E	V	K	D	V	T	G	A	G	D	A	M	A	S	G	Y	L	A	A	I	A	E	G	K	T	I	R	E	A	L	R	Q	G	A	A	A	A	A	I	T	V	Q	S	S	F	A	T	S	Q	D	L	S	K	D	S	V	E	A	M	L	G	L	V	P
Template Known Secondary structure										S	S	S		S					S	S													T	T																			S	S	T	T			G	G	G											T	T	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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