Job Description P77567 Confidence 18.82% Date Thu Jan 5 12:30:39 GMT 2012 Rank 57 Aligned Residues 57 % Identity 21% Template c2yqeA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d; PDBTitle: solution structure of the arid domain of jarid1d protein Resolution UNK

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		I	D	T	L	R	A	L	H	L	K	H	N	C	T	I	P	F	E	N	L	D	V	L	L	P	R	E	I	Q	L	D	N	Q	S	P	E	E	K	L	V	I	A	R	R	G	G	Y	.	C	F	E	Q	N	G	V	F	E	R	V	L	R	E	L	G	F
Query Conservation																																																	.
Alig confidence													.	.										.	.	.																.	.						.
Template Conservation													.	.										.	.	.																.	.
Template Sequence		L	D	Q	I	A	K	F	W	E	I	Q	.	.	G	S	S	L	K	I	P	N	V	.	.	.	E	R	K	I	L	D	L	Y	S	L	S	K	I	V	I	.	.	E	E	G	G	Y	E	A	I	C	K	D	R	R	W	A	R	V	A	Q	R	L	H	Y
Template Known Secondary structure													.	.	S	S						B		.	.	.	S	S	S	B												.	.			T								T	T	T								T	T
Template Predicted Secondary structure													.	.										.	.	.																.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions