Return to main results Retrieve Phyre Job Id

Job DescriptionQ93K97
Confidence99.80%DateThu Jan 5 12:37:43 GMT 2012
Rank11Aligned Residues129
% Identity19%Templated1vk6a2
SCOP infoNudix Nudix NADH pyrophosphatase
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.........110.........120.........130.....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  RGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPG
Query Conservation     

 
         





 
             




 

 

    

 


 



        
        
Alig confidence 










.
















.......











































Template Conservation       


 
 .    


          .......
 



  
 


   

 


 




                
Template Sequence  QIAPCIIVAIR. RDDSILLAQHTRHRNGV. . . . . . . HTVLAGFVEVGETLEQAVAREVXEESGIKVKNLRYVTSQPWPFP
Template Known Secondary structure 

.TTTTT
SS
.......
B


TT



TT
Template Predicted Secondary structure 



.







.......

















Template SS confidence 















































































   126...130...... ...140.........150... ......160.........170.........180.........190.......
 
   136...140.........150.........160.........170.........180.........190.........200..
Predicted Secondary structure 
























Query SS confidence 


































































Query Sequence  GTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQ
Query Conservation                           

 
 
 
 

   
    
  
 
 
  
  

        
Alig confidence  ..












.....


























...
















Template Conservation  ..             .....        
     
    

  
   ...  
   

   

  
 
Template Sequence  . . QSLXTAFXAEYDS. . . . . GDIVIDPKELLEANWYRYDDLPLLPPP. . . GTVARRLIEDTVAXCRA
Template Known Secondary structure  .......





TTTTTS

S


T...TS
Template Predicted Secondary structure  ..



.....














...
Template SS confidence 


































































   198.200.........210 .........220.........230....... ..240.........250....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions