Job Description Q93K97 Confidence 83.25% Date Thu Jan 5 12:37:43 GMT 2012 Rank 83 Aligned Residues 63 % Identity 14% Template c3p5tE_ PDB info PDB header:rna binding protein Chain: E: PDB Molecule:cleavage and polyadenylation specificity factor subunit 5; PDBTitle: cfim25-cfim68 complex Resolution 2.70 Å

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		59	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure														.	.																																																		.	.
Query SS confidence														.	.																																																		.	.
Query Sequence		A	A	V	L	L	P	F	D	P	V	R	D	.	.	E	V	V	L	I	E	Q	I	R	I	A	A	Y	D	T	S	E	T	P	W	L	L	E	M	V	A	G	M	I	E	E	G	E	S	V	E	D	V	A	R	R	E	A	I	E	E	A	G	L	.	.	I	V	K	R	T	K	P	V	L	S	F	L
Query Conservation														.	.																																																		.	.
Alig confidence														.	.								.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	E	G	V	L	I	V	H	E	H	R	L	P	H	V	L	L	L	Q	L	.	.	.	.	.	.	.	.	.	.	G	T	T	F	F	K	L	P	G	G	E	L	N	P	G	E	D	E	V	E	G	L	K	R	L	M	T	E	I	L	G	V	L	Q	D	W	V	I	D	D	C	I	G	N	W	W
Template Known Secondary structure												T	T										.	.	.	.	.	.	.	.	.	.	T	T	T					S						T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions