Job Description Q93K97 Confidence 99.55% Date Thu Jan 5 12:37:43 GMT 2012 Rank 62 Aligned Residues 108 % Identity 15% Template c3gz6A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of shewanella oneidensis nrtr complexed2 with a 27mer dna Resolution 2.90 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		A	V	L	L	P	F	D	P	V	R	D	E	V	V	L	I	E	Q	I	R	I	A	A	Y	D	T	S	E	T	P	W	L	L	E	M	V	A	G	M	I	E	E	G	.	.	E	S	V	E	D	V	A	R	R	E	A	I	E	E	A	G	L	I	V	K	R	T	K	P	V	L	S	F	L	A	S	P	G	G	T
Query Conservation																																													.	.
Alig confidence																								.	.	.	.	.	.																.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		A	V	L	F	T	Y	H	D	Q	Q	L	K	V	L	L	V	Q	R	S	N	H	P	.	.	.	.	.	.	F	L	G	L	W	G	L	P	G	G	F	I	D	E	T	C	D	E	S	L	E	Q	T	V	L	R	K	L	A	E	K	T	A	V	V	P	P	Y	I	E	Q	L	C	T	V	G	N	N	S	R	D	A
Template Known Secondary structure									S	S	S										S	S	S	.	.	.	.	.	.	S	T	T					S						T	T	T			S														S	S			S											S	S	S		T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	R	S	S	I	M	V	G	E	V	D	A	T	T	A	S	G	I	H	G	L	A	D	E	N	E	D	I	R	V	H	V	V	S	R	E	Q	A
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		R	G	W	S	V	T	V	C	Y	T	A	L	M	S	Y	Q	A	C	Q	I	.	.	.	Q	I	A	S	V	S	D	V	K	W	W	P	L	A	D	V
Template Known Secondary structure		T	S													S						.	.	.				S		S	S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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