Job Description P37672 Confidence 100.00% Date Thu Jan 5 11:56:44 GMT 2012 Rank 4 Aligned Residues 332 % Identity 24% Template c3i0pA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from entamoeba histolytica Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		M	K	V	T	F	E	Q	L	K	A	A	F	N	R	V	L	I	S	R	G	V	D	S	E	T	A	D	A	C	A	E	M	F	A	R	T	T	E	S	G	V	Y	S	H	G	V	N	R	F	P	R	.	F	I	Q	Q	L	E	N	G	D	I	I	P	D	A	Q	P	K	R	I	T	S	L	G	A	I	E	Q	W
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		K	N	V	S	I	D	T	I	K	E	F	M	Y	Q	V	L	L	K	V	G	S	D	E	E	N	A	R	M	V	R	D	T	L	I	A	A	D	L	R	G	M	D	T	H	G	I	Q	R	F	K	T	V	Y	I	D	R	I	K	K	G	M	I	N	P	T	A	K	P	S	I	I	R	E	T	S	T	T	C	V	L
Template Known Secondary structure																				T	T																				T		T	T	S	S	G	G	G					T						T	T		S		T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	Q	R	S	I	G	N	L	T	A	K	K	M	M	D	R	A	I	E	L	A	A	D	H	G	I	G	L	V	A	L	R	N	A	N	H	W	M	R	G	G	S	Y	G	W	Q	A	A	E	K	G	Y	I	G	I	C	W	T	N	S	I	A	V	M	P	P	W	G	A	K	E	C	R	I	G	T	N	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	N	N	G	F	G	H	V	N	G	T	I	G	M	K	M	A	I	E	K	A	K	K	Y	G	M	G	M	V	V	V	R	N	S	T	H	F	G	I	A	G	Y	Y	S	L	L	A	A	Q	E	G	C	I	G	I	C	G	T	N	A	R	S	S	V	A	A	T	F	G	D	E	P	I	L	G	T	N	P	L
Template Known Secondary structure				T	T																						S													S												T	T										S	S		B			T	T			S			B
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.								.	.
Predicted Secondary structure										.	.																																																.	.	.	.	.										.	.	.	.	.	.	.
Query SS confidence										.	.																																																.	.	.	.	.										.	.	.	.	.	.	.
Query Sequence		I	V	A	I	P	S	T	P	.	.	I	T	M	V	D	M	S	M	S	M	F	S	Y	G	M	L	E	V	N	R	L	A	G	R	Q	L	P	V	D	G	G	F	D	D	E	G	N	L	T	K	E	P	G	V	I	E	K	.	.	.	.	.	N	R	R	I	L	P	M	G	Y	.	.	.	.	.	.	.	W	K
Query Conservation										.	.																																																.	.	.	.	.										.	.	.	.	.	.	.
Alig confidence										.	.																																																.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	G	I	P	S	D	E	A	F	P	Y	C	F	D	G	A	T	S	I	S	P	T	G	R	F	E	K	Y	V	R	M	G	K	T	V	D	K	S	W	A	S	M	K	G	G	K	P	I	E	D	P	K	E	L	L	E	N	Y	P	K	G	K	A	Y	L	H	P	L	G	G	S	D	E	V	S	G	S	H	K
Template Known Secondary structure								S	S	S	S								S	B	S	S											T	T					S	S	S				T	T	S		B			S								T	T	T	T	S					B	T	T		S	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		G	S	G	M	S	I	V	L	D	M	I	A	T	L	L	S	D	G	A	S	V	A	E	V	.	.	T	Q	D	N	S	D	E	Y	G	I	S	Q	I	F	I	A	I	E	V	D	K	L	I	D	G	P	T	R	D	A	K	L	Q	R	I	M	D	Y	V	T	S	A	E	R	A	D	E	N	Q	A	I	R	L	P
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		G	Y	C	L	S	E	F	V	E	I	M	S	S	C	L	S	I	A	N	F	L	N	H	I	E	E	E	K	E	K	S	G	K	F	S	L	G	H	F	F	I	A	I	N	V	E	C	F	R	D	L	N	E	F	K	K	N	V	G	D	I	N	R	T	L	R	N	T	D	K	L	P	G	H	D	R	I	Y	T	A
Template Known Secondary structure															T	T	T	T				T	T										S	S												G	G	G	T	S																		T	S				T	T							T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	E	F	T	T	L	L	A	E	N	R	R	N	G	I	T	V	D	D	S	V	W	A	K	I	Q	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	K	E	Y	E	T	E	Q	K	R	R	K	F	G	D	D	L	P	L	V	T	I	N	E	M	K	E	L
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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