Job Description P37672 Confidence 100.00% Date Thu Jan 5 11:56:44 GMT 2012 Rank 5 Aligned Residues 328 % Identity 27% Template c1z2iA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of agrobacterium tumefaciens malate2 dehydrogenase, new york structural genomics consortium Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	T	F	E	Q	L	K	A	A	F	N	R	V	L	I	S	R	G	V	D	S	E	T	A	D	A	C	A	E	M	F	A	R	T	T	E	S	G	V	Y	S	H	G	V	N	R	F	P	R	F	I	Q	Q	L	E	N	G	D	I	I	P	D	A	Q	P	K	R	I	T	S	L	G	A	I	E	Q	W	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	A	R	L	D	E	L	E	R	F	C	R	A	V	F	L	A	V	G	T	D	E	E	T	A	D	A	A	T	R	A	M	M	H	G	T	R	L	G	V	D	S	H	G	V	R	L	L	A	H	Y	V	T	A	L	E	G	G	R	L	N	R	R	P	Q	I	S	R	V	S	G	F	G	A	V	E	T	I	D
Template Known Secondary structure																				T	T																			T	T		G	G	G	S	G	G	G											T	S	S		S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	R	S	I	G	N	L	T	A	K	K	M	M	D	R	A	I	E	L	A	A	D	H	G	I	G	L	V	A	L	R	N	A	N	H	W	M	R	G	G	S	Y	G	W	Q	A	A	E	K	G	Y	I	G	I	C	W	T	N	S	I	A	V	M	P	P	W	G	A	K	E	C	R	I	G	T	N	P	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	H	A	H	G	A	R	A	T	Y	A	A	M	E	N	A	M	A	L	A	E	K	F	G	I	G	A	V	A	I	R	N	S	S	H	F	G	P	A	G	A	Y	A	L	E	A	A	R	Q	G	Y	I	G	L	A	F	C	N	S	D	S	F	V	R	L	H	D	G	A	M	R	F	H	G	T	N	P	I	A
Template Known Secondary structure			S	S																						S													S		T										T	T	S									S			B			T	T		S	S			B
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure									.	.																																																									.	.	.
Query SS confidence									.	.																																																									.	.	.
Query Sequence		V	A	I	P	S	T	P	.	.	I	T	M	V	D	M	S	M	S	M	F	S	Y	G	M	L	E	V	N	R	L	A	G	R	Q	L	P	V	D	G	G	F	D	D	E	G	N	L	T	K	E	P	G	V	I	E	K	N	R	R	I	L	P	M	G	Y	.	.	.	W	K	G	S	G	M	S	I	V	L	D	M
Query Conservation									.	.																																																									.	.	.
Alig confidence									.	.																																														.	.	.									.	.	.
Template Conservation																																																								.	.	.
Template Sequence		V	G	V	P	A	A	D	D	M	P	W	L	L	D	M	A	T	S	A	V	P	Y	N	R	V	L	L	Y	R	S	L	G	Q	Q	L	P	Q	G	V	A	S	D	G	D	G	V	D	T	R	D	P	N	A	V	.	.	.	E	M	L	A	P	V	G	G	E	F	G	F	K	G	A	A	L	A	G	V	V	E	I
Template Known Secondary structure							S	S	S									S	B	S	S		T										T					T	T	S				T	T	S		B		S		T	T	T		.	.	.					B	T	T	G	G	G
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		I	A	T	L	L	S	D	G	A	S	V	A	E	V	T	Q	.	.	.	.	D	N	S	D	E	Y	G	I	S	Q	I	F	I	A	I	E	V	D	K	L	I	D	G	P	T	R	D	A	K	L	Q	R	I	M	D	Y	V	T	S	A	E	R	A	D	E	N	Q	A	I	R	L	P	G	H	E	F	T	T	L	L
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																																														.
Template Conservation																																																																			.
Template Sequence		F	S	A	V	L	T	G	M	R	L	S	F	D	L	A	P	M	G	G	P	D	F	S	T	P	R	G	L	G	A	F	V	L	A	L	K	P	E	A	F	L	E	R	D	V	F	D	E	S	M	K	R	Y	L	E	V	L	R	G	S	P	A	R	E	D	.	C	K	V	M	A	P	G	D	R	E	W	A	V	A
Template Known Secondary structure				T	T	T	T	S				G	G	G	S			S	S	S	S			S	S													G	G	G	T	S																			S			S	T	T	.						T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	N	R	R	N	G	I	T	V	D	D	S	V	W	A	K	I	Q	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	R	E	R	E	G	A	P	V	D	P	V	T	R	A	A	F	S	E	L
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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