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Job DescriptionP37672
Confidence100.00%DateThu Jan 5 11:56:44 GMT 2012
Rank7Aligned Residues325
% Identity26%Templatec1wtjB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ureidoglycolate dehydrogenase; PDBTitle: crystal structure of delta1-piperideine-2-carboxylate2 reductase from pseudomonas syringae pvar.tomato
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKVTFEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSHGVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWD
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Template Sequence  QTVSYPQLIDLLRRIFVVHGTSPEVADVLAENCASAQRDGSHSHGIFRIPGYLSSLASGWVDGKAVPVVEDVGAAFVRVD
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TT

TT
GGGTGGGTTSS
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TT
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  AQRSIGNLTAKKMMDRAIELAADHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLI
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Template Sequence  ACNGFAQPALAAARSLLIDKARSAGVAILAIRGSHHFAALWPDVEPFAEQGLVALSMVNSMTCVVPHGARQPLFGTNPIA
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TTSBS

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STT


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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   161...... ..170.........180.........190.........200.........210.........220.........230........
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Query Sequence  VAIPSTP. . ITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRILPMGYWKGSGMSIVLDMIAT
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Template Sequence  FGAPRAGGEPIVFDLATSAIAHGDVQIAAREGRLLPAGMGVDRDGLPTQEPRAILDGGALLPFGGHKGSALSMMVELLAA
Template Known Secondary structure  TT
SBSS
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TT

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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   239240......... 250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  LLSDGASVAEV. . . TQDNSDEYGISQIFIAIEVDKLIDGPTRDAKLQRIMDYVTSAERADENQAIRLPGHEFTTLLAENR
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Template Sequence  GLTGGNFSFEFDWSKHPGAQTPWTGQLLIVIDPDKGAG. QHFAQRSEELVRQLHGV. . . . . . GQERLPGDRRYLERARSM
Template Known Secondary structure  TTTS


TTS


TTSTT

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TTTT
S.S
T......T

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   251........260.........270.........280........ .290.........300..... ....310.........320...
 
   316...320.........330..
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Query Sequence  RNGITVDDSVWAKIQAL
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Template Sequence  AHGIVIAQADLERLQEL
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   324.....330.........340
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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