 |
Job Description | P19930 | Confidence | 81.71% | Date | Wed Jan 25 15:20:41 GMT 2012 |
Rank | 9 | Aligned Residues | 63 |
% Identity | 11% | Template | d1fmfa_ |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | UNK |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | E | Q | R | V | V | V | M | G | L | G | N | L | L | W | A | D | E | G | F | G | V | R | V | A | E | R | L | Y | A | H | Y | H | W | P | E | Y | V | E | I | V | D | G | G | . |
. |
T | Q | G | L | N | L | L | G | Y | V | E | S | A | S | H | . |
L | L | I | L | D | A | I | D | Y | G |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
| . | . |
|   |
|   |   |
|
|   |   |
|   |   |   |
|   | . |
|
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|
|
|   |   |   |   |
| . | . | . |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   | . | . | . | . |   |
|   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |
|   |   |
Template Sequence |   |
M | E | K | K | T | I | V | L | G | V | I | G | S | D | . |
. |
. |
C | H | A | V | G | N | K | I | L | D | H | S | F | T | N | . |
. |
. |
. |
A | G | F | N | V | V | N | I | G | V | L | S | S | Q | E | D | F | I | N | A | A | I | E | T | K | A | D | L | I | C | V | S | S | L | Y | G | Q |
Template Known Secondary structure |   |
|
| S |
|  |  |  |  |  |  |  | S | S | S | . | . | . |
| S | S | T | T | S | S | S |  |  |  |  |  |  | T | . | . | . | . | T | T |
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | S | S | S |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | |
|
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|