Return to main results Retrieve Phyre Job Id

Job DescriptionP33352
Confidence63.62%DateThu Jan 5 11:51:53 GMT 2012
Rank50Aligned Residues99
% Identity18%Templated2ji7a3
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module
Resolution1.82

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   277..280.........290.........300.........310.........320.........330.... .....340...
Predicted Secondary structure 




















.............








Query SS confidence 

























































. . . . . . . . . . . . .








Query Sequence  LGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGL. . . . . . . . . . . . . AALDSTATP
Query Conservation   



 
  

  
           






        
      
   

  
 
.............    
 
  
Alig confidence 














































..








.............








Template Conservation      
 

  
  



       

 
 




     

 

   ..     


 

                    
Template Sequence  SGTWGVMGIGMGYCVAAAAVTGKPVIAVEGDSAFGFSGMELETICRY. . NLPVTVIIMNNGGIYKGNEADPQPGVISCTR
Template Known Secondary structure 
TTTT
TT

S
TTGGGT..T


SBSS
S



SBTTB

TTB
Template Predicted Secondary structure 
















..


















Template SS confidence 















































































   422.......430.........440.........450.........460........ .470.........480.........490.........
 
   344.....350.........360... ......370.......
Predicted Secondary structure 







.

Query SS confidence 



















.













Query Sequence  CYDRDTAQALVNVGAQIAAM. TPGELASWLAENLQ
Query Conservation        
  

  
  
 
 . 
  

       
Alig confidence 



















.













Template Conservation           
 
 
     
    

  

  
  
Template Sequence  LTRGRYDMMMEAFGGKGYVANTPAELKAALEEAVA
Template Known Secondary structure 




TT

S
Template Predicted Secondary structure 









Template SS confidence 


































   500.........510.........520.........530....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions