Return to main results Retrieve Phyre Job Id

Job DescriptionP33352
Confidence99.50%DateThu Jan 5 11:51:53 GMT 2012
Rank10Aligned Residues123
% Identity20%Templated1yvra2
SCOP infovWA-like vWA-like RoRNP C-terminal domain-like
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   211........220.........230 .........240.........250.........260....... ..270.........280
Predicted Secondary structure 











.......









...






Query SS confidence 



















. . . . . . .




































. . .












Query Sequence  QSEQWQLVLLVDQSGSMVDS. . . . . . . VIHSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVAD. . . PVELLMKVQLGGG
Query Conservation             
 



   .......         
        
    
             ...    
     


Alig confidence 



















.......




































...












Template Conservation   
 
 
  
 






              
    
        
 

 
                     
     

Template Sequence  EPTGKRFLLAIDVSASMNQRVLGSILNASVVAAAMCMLVARTEKDSHMVAFSDEMLPCPITVNMLLHEVVEKMSDITMGS
Template Known Secondary structure 






SGGGGSBSTTSS
B
SSSSS

S

TTS
TT


S
Template Predicted Secondary structure 








































Template SS confidence 















































































   365....370.........380.........390.........400.........410.........420.........430.........440....
 
   281........290.........300.........310... ......320.........330.....
Predicted Secondary structure 













...



Query SS confidence 
































. . .





















Query Sequence  TNIASAVEYGRQLIEQPAKSVIILVSDFYEGGS. . . SSLLTHQVKKCVQSGIKVLGLA
Query Conservation 
 
  

  
           






     ...   
      
   

  
 
 
Alig confidence 












..

















...





















Template Conservation 
    

      ..    
 






            
  
        
   
 
Template Sequence  TDCALPMLWAQKT. . NTAADIFIVFTDCETNVEDVHPATALKQYREKMGIPAKLIVCA
Template Known Secondary structure 

TTT..T


S




SSS

T


Template Predicted Secondary structure 


..
















Template SS confidence 

























































   445....450....... ..460.........470.........480.........490.........500
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions