Job Description P33352 Confidence 98.59% Date Thu Jan 5 11:51:53 GMT 2012 Rank 32 Aligned Residues 94 % Identity 21% Template c3fcuB_ PDB info PDB header:cell adhesion/blood clotting Chain: B: PDB Molecule:integrin beta-3; PDBTitle: structure of headpiece of integrin aiibb3 in open conformation Resolution 2.90 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	W	Q	L	V	L	L	V	D	Q	S	G	S	M	V	D	S	.	.	.	.	.	V	I	H	S	A	V	M	A	A	C	L	W	Q	L	P	G	I	R	T	H	L	V	A	F	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	D	I	Y	Y	L	M	D	L	S	Y	S	M	K	D	D	L	W	S	I	Q	N	L	G	T	K	L	A	T	Q	M	R	K	L	T	S	N	L	R	I	G	F	G	A	F	V	D	K	P	V	S	P	Y	M	Y	I	S	P	P	E	A	L	E	N	P	C	Y	D	M	K	T	T	C	L	P	M	F	G	Y
Template Known Secondary structure												S	G	G	G	G	G	G																	T	T		S	S												S	S	T	T	T	S				S							T	T	G	G	G	T	S							S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
			257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.										.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure		.																																						.	.	.	.	.	.	.	.	.
Query SS confidence		.																																						.	.	.	.	.	.	.	.	.
Query Sequence		.	S	V	V	D	L	T	A	D	V	A	D	P	V	E	L	L	M	K	V	Q	L	G	G	G	T	N	I	A	S	A	V	E	Y	G	R	Q	L	.	.	.	.	.	.	.	.	.	I	E	Q	P	A	K	S	V	I	I	L	V	S	D
Query Conservation		.																																						.	.	.	.	.	.	.	.	.
Alig confidence		.																																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	H	V	L	T	L	T	D	Q	V	T	R	F	N	E	E	V	K	K	Q	S	V	S	R	N	R	D	A	P	E	G	G	F	D	A	I	M	Q	A	T	V	C	D	E	K	I	G	W	R	N	D	A	S	H	L	L	V	F	T	T	D
Template Known Secondary structure									S											T							S	S	S	S	B																	T			S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions