Job Description P33352 Confidence 99.61% Date Thu Jan 5 11:51:53 GMT 2012 Rank 5 Aligned Residues 156 % Identity 19% Template c1rs0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: crystal structure analysis of the bb segment of factor b2 complexed with di-isopropyl-phosphate (dip) Resolution 2.60 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.						.
Predicted Secondary structure																										.	.	.	.	.	.																										.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.																										.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		Q	L	V	L	L	V	D	Q	S	G	S	M	V	D	S	V	I	H	S	A	V	M	A	A	.	.	.	.	.	.	C	L	W	Q	L	P	G	I	R	T	H	L	V	A	F	D	T	S	V	V	D	L	T	A	D	.	.	.	.	.	.	.	V	A	D	P	V	E	L	L	M	K	V	Q	.	.	.	.	.	L
Query Conservation																										.	.	.	.	.	.																										.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																										.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		N	I	Y	L	V	L	D	G	S	D	S	I	G	A	S	N	F	T	G	A	K	K	V	L	V	N	L	I	E	K	V	A	S	Y	G	V	K	P	R	Y	G	L	V	T	Y	A	T	Y	P	K	I	W	V	K	V	S	E	A	D	S	S	N	A	D	W	V	T	K	Q	L	N	E	I	N	Y	E	D	H	K	L
Template Known Secondary structure										S	T	T	T																						T	T											S	S	S							T	T	S	G	G	G	G														G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.										.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																			.	.	.	.																		.	.													.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.																		.	.													.	.	.	.	.	.	.	.	.
Query Sequence		G	G	G	T	N	I	A	S	A	V	E	Y	G	R	Q	L	I	.	.	.	.	E	Q	P	A	K	S	V	I	I	L	V	S	D	F	Y	E	G	.	.	G	S	S	S	L	L	T	H	Q	V	K	K	.	.	.	.	.	.	.	.	.	C	V	Q	S	G	I	K	V	L	G	L	A	A	L	D	S	T	A	T
Query Conservation																			.	.	.	.																		.	.													.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.																		.	.													.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		K	S	G	T	N	T	K	K	A	L	Q	A	V	Y	S	M	M	S	W	P	G	W	N	R	T	R	H	V	I	I	L	M	T	D	G	L	H	N	M	G	G	D	P	I	T	V	I	D	E	I	R	D	L	L	Y	I	G	K	D	R	N	P	R	E	D	Y	L	D	V	Y	V	F	G	V	G	P	L	.	.	.
Template Known Secondary structure		T	T																				G	G	G											S				S	S	S		T											T	T		S	S						G	G	G									S	S	S	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.				360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		P	C	Y	D	R	D	T	A	Q	A	L	V	N	V	G	A	Q	.	.	.	I	A	A	M	T	P	G	E	L	A	S	W	L	A	E	N	L
Query Conservation																			.	.	.
Alig confidence		.	.																.	.	.
Template Conservation		.	.
Template Sequence		.	.	V	N	Q	V	N	I	N	A	L	A	S	K	K	D	N	E	Q	H	V	C	K	V	K	D	M	E	C	L	E	D	V	F	Y	Q	M
Template Known Secondary structure		.	.										S				T	T							T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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