Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB55
Confidence99.02%DateThu Jan 5 11:14:41 GMT 2012
Rank2Aligned Residues90
% Identity18%Templated1s7ia_
SCOP infoFerredoxin-like Dimeric alpha+beta barrel DGPF domain (Pfam 04946)
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.. .......20.........30.........40.... .....50.........
Predicted Secondary structure 




.....






................













Query SS confidence 











. . . . .































. . . . . . . . . . . . . . . .














Query Sequence  MLYVIYAQDKAD. . . . . SLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP. . . . . . . . . . . . . . . . AVDSNDPGAAGFTGS
Query Conservation 
 
 
   
 
 .....  
 
   
  
   
      
    


  ................             

Alig confidence 











.....































................














Template Conservation 





             

         
    
  

  
 
  
 
   
  

   
   





 



 


Template Sequence  MKYLCLIYFDEAKLAAVPAEELAAIVDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDGPFAETKEQLGG
Template Known Secondary structure 
GGGSSSS
T



GGG

SS
S
SS

SS
Template Predicted Secondary structure 
































Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   60.........70.........80.........90...
Predicted Secondary structure 







Query SS confidence 

































Query Sequence  TVIAEFESLEAAQAWADADPYVAAGVYEHVSVKP
Query Conservation    
  
 
 


   
  


   

     
 
Alig confidence 
























...





Template Conservation 
 


  
 




 
   
    
... 




Template Sequence  FYLIEARDLNQALQIAAKIPPGRLG. . . CVEVRP
Template Known Secondary structure  SSTT
GGGGGS...
Template Predicted Secondary structure 








...
Template SS confidence 

































   87..90.........100.........110. ......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions