Job Description P37325 Confidence 95.82% Date Thu Jan 5 11:55:12 GMT 2012 Rank 27 Aligned Residues 153 % Identity 20% Template d1vema2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.85

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																						.																																										.	.	.	.	.
Query SS confidence																						.																																										.	.	.	.	.
Query Sequence		L	V	S	P	F	S	F	A	M	K	G	I	I	W	Q	P	Q	N	R	D	.	S	Q	V	T	D	T	Q	W	Q	G	L	M	S	Q	L	R	L	Q	G	F	D	T	L	V	L	Q	W	T	R	Y	G	D	A	F	T	Q	P	E	Q	R	T	.	.	.	.	.	L	L	F	K	R	A	A	A	A	Q	Q	A	G
Query Conservation																						.																																										.	.	.	.	.
Alig confidence						.	.	.														.																										.								.	.							.	.	.	.	.
Template Conservation						.	.	.																																								.								.	.
Template Sequence		G	M	N	P	.	.	.	D	Y	K	A	Y	L	M	A	P	L	K	K	I	P	E	V	T	N	W	E	T	F	E	N	D	L	R	W	A	K	Q	N	G	F	Y	A	I	T	V	.	D	F	W	W	G	D	M	.	.	E	K	N	G	D	Q	Q	F	D	F	S	Y	A	Q	R	F	A	Q	S	V	K	N	A	G
Template Known Secondary structure					T	.	.	.	T									S	S		G	G	G	T	S															T	T							.								.	.	T		S	S	T	T																	T	T
Template Predicted Secondary structure						.	.	.																																								.								.	.
Template SS confidence
		6	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		87	.	.	90												.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.																										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.							.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.							.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	L	I	.	.	.	.	.	.	.	.	.	.	.	V	G	L	N	A	D	.	.	.	P	E	F	F	M	H	Q	K	Q	S	S	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	S	Y	L	N	R	L	L	A	A	D	L	Q	Q	A	R	L
Query Conservation						.	.	.	.	.	.	.	.	.	.	.							.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.							.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	M	I	P	I	I	S	T	H	Q	C	G	G	N	V	G	D	D	C	N	V	P	I	P	S	W	V	W	N	Q	K	S	D	D	S	L	Y	F	K	S	E	T	G	T	V	N	K	E	T	L	N	P	L	A	S	D	V	I	R	K	E	Y	G	E	L	Y	T	A	F	A	A	A	M	K	P	Y	K	D	V
Template Known Secondary structure											S		B	S	S	S	T	T					B				G	G	G	G	G	G		S	S	S		S	S				T	T						S	S			T	T																				T	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		128	.	130												.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.				.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.				.	.
Query Sequence		W	S	A	.	.	.	.	.	.	.	.	.	.	.	A	P	G	.	.	I	T	P	D	G	W	Y	I	S	A	E	I	D	D	L	N	W	R	S	E	A	A	R	Q	P	L	L	T	W	L	N	N	A	Q	R	L	I	S	D
Query Conservation					.	.	.	.	.	.	.	.	.	.	.				.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.				.	.															.
Template Conservation																																			.
Template Sequence		I	A	K	I	Y	L	S	G	G	P	A	G	E	L	R	Y	P	S	Y	T	T	S	D	G	T	G	Y	P	S	R	G	K	F	.	Q	A	Y	T	E	F	A	K	S	K	F	R	L	W	V	L	N	K	Y	G	S	L	N	E
Template Known Secondary structure		B								S	G	G	G	B	S	S						T	T	T	T			T	T	S					.				S																S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions