 |
Job Description | P37325 | Confidence | 32.55% | Date | Thu Jan 5 11:55:12 GMT 2012 |
Rank | 179 | Aligned Residues | 52 |
% Identity | 10% | Template | d1m53a2 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 2.20 |
|
 |
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | M | S | Q | L | R | L | Q | G | F | D | T | L | V | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | W | T | R | Y | G | D | A | F | T | Q | P | E | Q | R | T | L | L | F | K | R | A | A | A | A | Q | Q | A | G | L | K | L | I | V | G | L | N | A | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   | . | . |   |
|
| . |   |   |
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |
|
|
|
|   |
|   |
|
Template Sequence |   |
E | K | L | D | Y | L | K | S | L | G | I | D | A | I | W | I | N | P | H | Y | D | S | P | N | T | D | N | G | Y | D | I | S | N | Y | R | Q | I | M | K | E | . |
. |
Y | G | T | . |
M | E | D | F | D | S | L | V | A | E | M | K | K | R | N | M | R | L | M | I | D | V | V | I | N |
Template Known Secondary structure |   |
 | T |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
|  |  |
|
|
| T | T | T | T | S | S |
| S |  |  |  |  |  |
| G | G | . | . | G |
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
. | . | . | |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|