Return to main results Retrieve Phyre Job Id

Job DescriptionP37325
Confidence97.29%DateThu Jan 5 11:55:12 GMT 2012
Rank7Aligned Residues128
% Identity14%Templatec3thdD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:beta-galactosidase; PDBTitle: crystal structure of human beta-galactosidase in complex with 1-2 deoxygalactonojirimycin
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50........ .60.. .......70.........80.........90. ...
Predicted Secondary structure 






..
....













.............

Query SS confidence 
























. .



. . . .




























. . . . . . . . . . . . .


Query Sequence  QVTDTQWQGLMSQLRLQGFDTLVLQ. . WTRY. . . . GDAFTQPEQRTLLFKRAAAAQQAGLKLIV. . . . . . . . . . . . . GLN
Query Conservation        

        

  




..

 
....
     
     
   
  
   



 
.............

 
Alig confidence 
























..



....









..
















.............

.
Template Conservation 
 
 
 
 
 
 
 

 
 
 
 


 

 


  
  

 
  
..
  

  
   

 



 



 


  

 .
Template Sequence  RVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHD. . VEYFLRLAHELGLLVILRPGPYICAEWEMGGL.
Template Known Secondary structure  GS
GGGTT
S


SBTTB


SGGG
..TT


S


TTBGGGG
.
Template Predicted Secondary structure 






















..













.
Template SS confidence 















































































   5960.........70.........80.........90.........100... ......110.........120.........130.....
 
   95....100..... ....110.........120.........130.........140.........150.........160......
Predicted Secondary structure 




.....















Query SS confidence 










. . . . .




























































Query Sequence  ADPEFFMHQKQ. . . . . SSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLLTWLNNA
Query Conservation   

 


    .....
       
          
    
     
 




 


   
     
  
   
   
Alig confidence  ..








.....




























































Template Conservation  ..
 

        

 
  
          
           




  






 
   
  
   
       
Template Sequence  . . PAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHH
Template Known Secondary structure  ..
GGGGGSTT

SSS

GGGBGGGTSS
SS
GGGSS


Template Predicted Secondary structure  ..
























Template SS confidence 












































































   136...140.........150.........160.........170.........180.........190.........200.........210
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions