Job Description P37325 Confidence 21.65% Date Thu Jan 5 11:55:12 GMT 2012 Rank 208 Aligned Residues 53 % Identity 17% Template c3k8kB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:alpha-amylase, susg; PDBTitle: crystal structure of susg Resolution 2.20 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		M	S	Q	L	R	L	Q	G	F	D	T	L	V	L	.	.	.	.	.	.	.	Q	W	T	R	Y	G	D	A	F	T	Q	P	E	Q	R	T	.	.	.	.	.	L	L	F	K	R	A	A	A	A	Q	Q	A	G	L	K	L	I	V	G	L	N	A	D
Query Conservation																.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		L	D	Y	L	N	Q	L	G	V	K	A	L	W	L	S	P	I	H	P	C	X	S	Y	H	G	Y	D	V	T	D	Y	T	K	V	N	P	Q	L	G	T	E	S	D	F	D	R	L	V	T	E	A	H	N	R	G	I	K	I	Y	L	D	Y	V	X	N
Template Known Secondary structure								T	T		S								S		B	S	S	T	T			S	B	S		T	T	S			T	T	T																T	T										S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions