|   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | |
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. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
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. | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  | . | . |  |  |  |  |
| . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
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Query SS confidence |   |
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| . |
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| . |
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. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
Q | V | T | D | T | Q | W | Q | G | L | M | S | Q | L | R | L | Q | G | F | D | T | L | V | L | . |
. |
Q | W | T | R | Y | . |
. |
. |
. |
G | D | A | F | T | Q | P | E | Q | R | T | L | L | F | K | R | A | A | A | A | Q | Q | A | G | L | K | L | I | V | . |
. |
. |
. |
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. |
. |
. |
. |
G | L | N |
Query Conservation |   |
  |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |
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|   |   |
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| . | . |
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|   |
| . | . | . | . |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
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|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
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|   |
Alig confidence |   |
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| . | . |
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| . | . | . | . |
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| . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . |
Template Conservation |   |
|   |
|   |   |   |
|   |
|   |
|   |
|   |
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|   |
|   |
|   |
|   |
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|   |
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|   |
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|   |   |
|   |   |
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|   |
|   |   |
| . | . |
|   |   |
|   |   |
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|   |
|   |
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|   |
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|   |
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|   |
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|   |   |
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|   | . |
Template Sequence |   |
R | I | P | K | E | Y | W | E | H | R | I | K | X | C | K | A | L | G | X | N | T | I | C | L | Y | V | F | W | N | F | H | E | P | E | E | G | R | Y | D | F | A | G | Q | K | D | . |
. |
I | A | A | F | C | R | L | A | Q | E | N | G | X | Y | V | I | V | R | P | G | P | Y | V | C | A | E | W | E | X | G | G | L | . |
Template Known Secondary structure |   |
G | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
|  |  |  |  |
| S | S | T | T |
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| S | G | G | G |
| . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
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| S |
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| T | T | B | G | G | G | G |
| . |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |
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|  |  |  |  |
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|  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |
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| . |
Template SS confidence |   |
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  |   |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
  |
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | |
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. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
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| . |
. |
. |
. |
. |
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Query Sequence |   |
A | D | P | E | F | F | M | H | Q | K | Q | . |
. |
. |
. |
. |
S | S | A | A | L | E | S | Y | L | N | R | L | L | A | A | D | L | Q | Q | A | R | L | W | S | A | A | P | G | I | T | P | D | G | W | Y | I | S | A | E | I | D | D | L | N | W | R | S | E | A | A | R | Q | P | L | L | T | W | L | N | N | A |
Query Conservation |   |
  |
|
|   |
|
|
|   |   |   |   | . | . | . | . | . |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |
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|   |
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|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
. | . |
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| . | . | . | . | . |
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| . |
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Template Conservation |   |
. | . |
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
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|   |   |
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|
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|
|
|
|   | . |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
P | W | W | L | L | K | K | K | D | I | K | L | R | E | Q | D | P | Y | Y | X | E | R | V | K | L | F | L | N | E | V | G | K | Q | L | A | D | L | Q | I | S | K | G | G | N | I | I | X | V | Q | V | E | N | E | Y | G | A | . |
F | G | I | D | K | P | Y | I | S | E | I | R | D | X | V | K | Q | A |
Template Known Secondary structure |   |
. | . |
| G | G | G | G | G | S | T | T |
|
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | B | G | G | G | T | S | S |  |  |  |  |  |
| S | S |
| G | G | G | . | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . |
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |
|
|
|
|
|
| . |
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
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|
  |   |
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
  |