Job Description P37325 Confidence 30.64% Date Thu Jan 5 11:55:12 GMT 2012 Rank 182 Aligned Residues 139 % Identity 14% Template c3bgaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-galactosidase; PDBTitle: crystal structure of beta-galactosidase from bacteroides2 thetaiotaomicron vpi-5482 Resolution 2.10 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		L	L	V	S	P	F	S	F	A	M	K	G	I	I	W	Q	P	Q	N	R	D	.	S	Q	V	T	D	T	Q	W	Q	G	L	M	S	Q	L	R	L	Q	G	F	D	T	L	V	L	Q	W	T	R	Y	G	D	A	F	T	Q	P	E	Q	R	T	L	L	F	K	R	A	A	A	A	Q	Q	A	G	L	K	L	I
Query Conservation																							.
Alig confidence																							.																										.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.						.	.	.	.	.	.	.	.	.	.
Template Sequence		F	C	I	N	G	V	P	V	L	V	K	G	T	N	R	H	E	H	S	Q	L	G	R	T	V	S	K	E	L	X	E	Q	D	I	R	L	X	K	Q	H	N	I	N	X	V	R	N	.	.	S	H	Y	P	T	.	.	.	.	.	.	.	.	.	.	H	P	Y	W	Y	Q	L	C	D	R	Y	G	L	Y	X	I
Template Known Secondary structure					T	T														B	T	T	B	S																	T	T							.	.	T	T	S			.	.	.	.	.	.	.	.	.	.												T
Template Predicted Secondary structure																																																	.	.						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.			.	.	.	.	.											.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		91	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		V	G	L	N	A	D	P	.	.	.	.	E	F	F	M	H	Q	K	Q	S	S	A	A	L	E	S	Y	L	N	R	L	L	A	A	D	L	Q	Q	A	R	L	W	S	A	A	P	G	I	T	P	D	G	W	Y	I	S	A	E	I	D	D	L	N	W	R	S	E	A	A	R	Q	P	L	L	T	W	L	N	N	A
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																				.	.	.	.														.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.														.	.													.	.	.	.	.	.	.	.	.
Template Sequence		D	E	A	N	I	E	S	H	G	X	G	Y	G	P	A	S	L	A	K	D	S	T	W	L	T	A	H	X	D	R	.	.	.	.	T	H	R	X	Y	E	R	S	K	N	H	P	A	.	.	I	V	I	W	S	Q	G	N	E	A	G	N	.	.	.	.	.	.	.	.	.	G	I	N	F	E	R	T	Y	D	W
Template Known Secondary structure					S		B		G	G	G		S	S	T	T		T	T	T		G	G	G								.	.	.	.									T	T		T	T	.	.								S	S	S			.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																.	.	.	.														.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.					.	.	.	.	.	.	.	470	.	.	.	.	.			.	.	.	.	480	.	.	.	.	.	.	.										.	.	490	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	I	S	D	V	S	A	K	P	V	Y
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		L	K	S	V	E	K	.	.	G	R	P	V	Q
Template Known Secondary structure							S	.	.	S	S
Template Predicted Secondary structure								.	.
Template SS confidence
		498	.	500	.	.	.			.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions