Job Description P37325 Confidence 84.52% Date Thu Jan 5 11:55:12 GMT 2012 Rank 64 Aligned Residues 113 % Identity 10% Template c2wcsA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha amylase, catalytic region; PDBTitle: crystal structure of debranching enzyme from nostoc2 punctiforme (npde) Resolution 2.80 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.																.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	Q	L	R	L	Q	G	F	D	T	L	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	T	R	Y	G	D	A	F	T	Q	P	E	Q	R	T	L	L	F	K	R	A	A	A	A	Q	Q	A	G	L	K	L	I	V	G	L	N	A	D	P	E	F	F	M	H	Q	K	Q	S	S	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.							.																							.	.	.	.	.
Template Conservation																																							.	.							.																							.	.	.	.	.
Template Sequence		L	D	Y	I	Q	N	L	G	I	N	A	I	Y	F	T	P	I	F	Q	S	A	S	N	H	R	Y	H	T	H	D	Y	Y	Q	V	D	P	M	.	.	L	G	G	N	E	A	.	F	K	E	L	L	D	A	A	H	Q	R	N	I	K	V	V	L	D	G	V	F	N	.	.	.	.	.	H	S	S	R	G	F	F
Template Known Secondary structure									T							S						S	T	T		T	T	S									G	G	.	.	G	T					.											T	T										S	.	.	.	.	.	B			T	T	S
Template Predicted Secondary structure																																							.	.							.																							.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.									.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		A	L	E	S	Y	L	N	R	L	L	A	A	D	L	Q	Q	A	.	.	.	.	.	.	.	.	R	L	W	S	A	A	P	G	I	T	P	D	G	W	Y	I	S	A	E	I	D	D	L	N	W	R	S	E	A	A	R	Q	P	L	L	T	W	L	N
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	F	H	D	V	L	E	N	G	P	H	S	P	W	V	N	W	F	K	I	E	G	W	P	L	S	P	Y	N	G	E	F	P	A	N	Y	V	G	W	A	G	N	R	A	L	P	E	F	N	H	D	N	P	E	V	R	E	Y	I	M	E	I	A	E
Template Known Secondary structure										G	G	G		T	T	G	G	G	B		B		S	S	S			S	S			S	S			S	B		B	G	G	G		T	T	S	B	B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions