Job Description P37325 Confidence 48.18% Date Thu Jan 5 11:55:12 GMT 2012 Rank 131 Aligned Residues 132 % Identity 16% Template c2dh3A_ PDB info PDB header:transport protein, signaling protein Chain: A: PDB Molecule:4f2 cell-surface antigen heavy chain; PDBTitle: crystal structure of human ed-4f2hc Resolution 2.80 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.															.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	Q	L	R	L	Q	G	F	D	T	L	V	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	T	R	Y	G	D	A	F	T	Q	P	E	Q	R	T	L	L	F	K	R	A	A	A	A	Q	Q	A	G	L	K	L	I	V	G	L	N	A	D	P	E	F	F	M	H	Q	K	Q	S	S	A	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.							.																							.	.	.	.	.	.
Template Conservation																																						.	.							.																							.	.	.	.	.	.
Template Sequence		L	D	Y	L	S	S	L	K	V	K	G	L	V	L	G	P	I	H	K	N	Q	K	D	D	V	A	Q	T	D	L	L	Q	I	D	P	N	.	.	F	G	S	K	E	D	.	F	D	S	L	L	Q	S	A	K	K	K	S	I	R	V	I	L	D	L	T	P	N	.	.	.	.	.	.	Y	R	G	E	N	S	W
Template Known Secondary structure							T	T	T														T	T		S	T	T								T	T	.	.	T						.											T	T									T	T	.	.	.	.	.	.	T	T	S	S	S	T	T
Template Predicted Secondary structure																																						.	.							.																							.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	S	Y	L	N	R	L	L	A	A	D	L	Q	Q	A	R	L	W	S	A	A	P	G	I	T	P	D	G	W	Y	I	S	A	E	I	D	D	L	N	W	R	S	E	A	A	R	Q	P	L	L	T	W	L	N	N	A	Q	R	L	I	S	D	V	S	A	K	P	V	Y	I	S	S	F	F	A	G	N	M	S
Query Conservation
Alig confidence																						.				.	.							.	.	.	.	.		.																								.	.	.														.	.
Template Conservation																						.				.	.							.	.	.	.	.		.																								.	.	.														.	.
Template Sequence		F	S	T	Q	V	D	T	V	A	T	K	V	K	D	A	L	E	F	W	L	.	Q	A	G	.	.	V	D	G	F	Q	V	.	.	.	.	.	R	.	D	I	E	N	L	K	D	A	S	S	F	L	A	E	W	Q	N	I	T	K	G	F	S	.	.	.	E	D	R	L	L	I	A	G	T	N	S	S	D	.	.
Template Known Secondary structure		S	S	S			T															.		T	T	.	.							.	.	.	.	.		.		G	G	G	S	T	T																	.	.	.	S	S								S				.	.
Template Predicted Secondary structure																						.				.	.							.	.	.	.	.		.																								.	.	.														.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240			.	.	.	.	.	.						.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.
		190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	G	Y	R	Q	L	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	Q	I	L	S	L	L	E
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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