Job Description P37325 Confidence 34.33% Date Thu Jan 5 11:55:12 GMT 2012 Rank 172 Aligned Residues 72 % Identity 22% Template c1hvxA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase; PDBTitle: bacillus stearothermophilus alpha-amylase Resolution 2.00 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.																.	.	70	.	.	.	.
Predicted Secondary structure																				.	.	.	.																		.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.																		.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	I	W	Q	P	Q	N	R	D	S	Q	V	T	D	T	Q	W	.	.	.	.	Q	G	L	M	S	Q	L	R	L	Q	G	F	D	T	L	V	L	.	.	.	.	.	.	.	.	.	Q	W	T	R	Y	G	D	A	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	E	Q	R	T	L
Query Conservation																				.	.	.	.																		.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.						.	.	.	.																		.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation														.																																																																.
Template Sequence		G	T	M	M	Q	Y	F	E	W	Y	L	P	.	D	D	G	T	L	W	T	K	V	A	N	E	A	N	N	L	S	S	L	G	I	T	A	L	W	L	P	P	A	Y	K	G	T	S	R	S	D	V	G	Y	G	V	Y	D	L	Y	D	L	G	E	F	N	Q	K	G	A	V	R	T	K	Y	G	T	.	K	A	Q
Template Known Secondary structure										T	T			.	S	S	S																T	T										S			S	S	T	T			S	S	S				T	T		S	S		S		B	T	T	B	S	S		S	S			.
Template Predicted Secondary structure														.																																																																.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	K	R	A	A	A	A	Q	Q	A	G	L	K	L	I	V	G	L	N	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	Q	A	I	Q	A	A	H	A	A	G	M	Q	V	Y	A	D	V	V	F	D
Template Known Secondary structure												T	T										S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions