Return to main results Retrieve Phyre Job Id

Job DescriptionP37325
Confidence96.73%DateThu Jan 5 11:55:12 GMT 2012
Rank18Aligned Residues137
% Identity12%Templatec1bhgB_
PDB info PDB header:glycosidaseChain: B: PDB Molecule:beta-glucuronidase; PDBTitle: human beta-glucuronidase at 2.6 a resolution
Resolution2.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.... .....40.........50.........60.........70.........80.........90........
Predicted Secondary structure 






..

























Query SS confidence 













. .































































Query Sequence  MKGIIWQPQNRDSQ. . VTDTQWQGLMSQLRLQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAAAAQQAGLKLIVGLNADPE
Query Conservation    


 

 
 
  ..     

        

  






 

     
     
   
  
   



 


  

 
Alig confidence 













..






















..





..........






















Template Conservation 


 
        
           
   
  
 
 

 ..      ..........    
  
  



  
      
Template Sequence  FHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRT. . SHYPYA. . . . . . . . . . EEVMQMCDRYGIVVIDECPGVGL
Template Known Secondary structure 




TTTTT


T


..TTS

S..........TTTT


S



Template Predicted Secondary structure 
















..





..........








Template SS confidence 















































































   345....350.........360.........370.........380... ...... 390.........400.........410..
 
   99100.........110.........120.........130.........140.........150.........160.........170........
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  FFMHQKQSSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLLTWLNNAQRLISDVSAKPV
Query Conservation 


    
       
          
    
     
 




 


   
     
  
   
           
 

Alig confidence 






.....






















..












....



















..



Template Conservation         .....              
 
  



..

 
   

    ....          
    
  

..

 
Template Sequence  ALPQFFN. . . . . NVSLHHHMQVMEEVVRRDKNHPA. . VVMWSVANEPASH. . . . LESAGYYLKMVIAHTKSLDP. . SRPV
Template Known Secondary structure 
SGGGGS.....TT
TT..

S

TT....STTTTT
T..TS
Template Predicted Secondary structure 






.....



..







....




..

Template SS confidence 















































































   413...... 420.........430.........440.. .......450..... ....460.........470..... ....
 
   179180..
Predicted Secondary structure 
Query SS confidence 



Query Sequence  YISS
Query Conservation   

 
Alig confidence 



Template Conservation      
Template Sequence  TFVS
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 



   480...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions