 |
Job Description | P64467 | Confidence | 3.52% | Date | Thu Jan 5 12:08:38 GMT 2012 |
Rank | 73 | Aligned Residues | 40 |
% Identity | 23% | Template | c3cveC_ |
PDB info |
PDB header:signaling protein | Chain: C: PDB Molecule:homer protein homolog 1; |
PDBTitle: crystal structure of the carboxy terminus of homer1
|
Resolution | 1.75 Å |
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | K | L | Y | D | H | L | N | Y | T | L | T | D | D | Q | E | L | I | N | M | Y | R | A | A | D | H | R | R | A | E | L | V | S | G | G | R | L | F | D | L |
Query Conservation |   |
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |
|   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |
|
|   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |
| . |
|   |
|
|
|
|
|
Template Sequence |   |
L | E | G | Q | L | S | E | X | E | Q | R | L | E | K | S | Q | S | E | Q | D | A | F | R | S | N | L | K | T | L | L | E | I | L | . |
D | G | K | I | F | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | |
. | . | . | . | . | . | 340 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|