Job Description P00961 Confidence 67.39% Date Wed Jan 25 15:20:10 GMT 2012 Rank 35 Aligned Residues 146 % Identity 15% Template d1vqra_ SCOP info HD-domain/PDEase-like HD-domain/PDEase-like modified HD domain Resolution 2.25

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		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.				.	.	.	400	.	.	.	.	.	.	.	.																								.	410	.	.	.
Predicted Secondary structure																						.																	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	D	K	T	D	R	I	Q	A	L	A	G	W	I	A	E	Q	I	G	.	A	D	V	N	H	A	T	R	A	G	L	L	S	K	C	D	.	.	.	L	M	T	N	M	V	F	E	F	T	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	V	M	G
Query Conservation																						.																	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	K	T	C	N	E	E	A	T	F	I	A	N	W	L	N	D	E	D	K	K	L	S	H	L	L	V	P	C	A	X	L	L	R	L	G	I	V	I	F	S	N	F	L	I	Q	N	H	K	D	K	D	F	L	A	F	L	N	K	N	E	N	L	A	L	A	E	N	E	F	L	G	V	D	H	I	S	F	L
Template Known Secondary structure																		T	T	T																													T	T																							T	S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	Y	A	R	H	D	G	E	A	E	D	V	A	V	A	L	N	E	Q	Y	Q	P	R	F	A	G	D	D	L	P	S	N	P	V	A	C	A	L	A	I	A	D	K	M	D	T	L	A	G	I	F	G	I	G	Q	H	P	K	G	D	K	D	P	F	A	L	R	R	A	A	L	G	V	L	R	I	I	V	E
Query Conservation
Alig confidence																														.	.																.	.	.	.	.	.	.	.	.	.												.
Template Conservation																														.	.																.	.	.	.	.	.	.	.	.	.												.
Template Sequence		G	F	L	L	H	R	W	N	F	D	D	V	L	I	E	S	I	C	F	V	R	T	P	H	A	A	R	E	.	.	K	V	K	K	S	A	Y	A	L	A	I	T	D	H	L	.	.	.	.	.	.	.	.	.	.	F	A	P	H	D	G	S	S	P	F	N	.	A	K	A	A	V	A	L	L	K	E	A	K	T
Template Known Secondary structure								T	T											T	T	T		G	G	G	S		T	.	.	T	T														.	.	.	.	.	.	.	.	.	.			T	T	T	T	T					.
Template Predicted Secondary structure																														.	.																.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.											.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	L	N	L	D	L	Q	T	L	T	E	E	A	V	R	L	Y	G	D	K	L	T	N	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	I	N	F	D	L	N	N	L	L	S	K	L	P	N	K	A	K	E	N	L	N	K	E	D
Template Known Secondary structure		T	T												S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions