 |
Job Description | P00961 | Confidence | 54.35% | Date | Wed Jan 25 15:20:10 GMT 2012 |
Rank | 38 | Aligned Residues | 85 |
% Identity | 15% | Template | d1riqa1 |
SCOP info | Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
| Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
| Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
|
Resolution | 2.14 |
|
 |
  |   |
454 | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | |
500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | |
|
|
|
. | . | 520 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | D | K | M | D | T | L | A | G | I | F | G | I | G | Q | H | P | K | G | D | K | D | P | F | A | L | R | R | A | A | L | G | V | L | R | I | I | V | E | K | N | L | N | L | D | . |
L | Q | T | L | T | E | E | A | V | R | L | Y | G | D | K | L | T | N | . |
. |
. |
. |
A | N | V | V | D | D | V | I | D | F | M |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |
|   | . |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |   |   |
|   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|
Template Sequence |   |
I | A | D | H | L | R | A | I | T | F | A | I | S | D | G | V | I | P | S | N | E | G | R | G | Y | V | I | R | R | I | L | R | R | A | X | R | F | G | Y | K | L | G | I | E | N | P | F | L | Y | K | G | V | D | L | V | V | D | I | X | K | E | P | Y | P | E | L | E | L | S | R | E | F | V | K | G | I | V | K | G | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
269 | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . |
  |
  |   |
529 | 530 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | R | F | R | A | W | Y | Q | D |
Query Conservation |   |
  |   |
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |
Template Sequence |   |
E | K | R | F | I | K | T | L | K | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
349 | 350 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|