 |
Job Description | P00961 | Confidence | 19.41% | Date | Wed Jan 25 15:20:10 GMT 2012 |
Rank | 69 | Aligned Residues | 53 |
% Identity | 19% | Template | d1i7da_ |
SCOP info | Prokaryotic type I DNA topoisomerase
| Prokaryotic type I DNA topoisomerase
| Prokaryotic type I DNA topoisomerase
|
Resolution | 2.05 |
|
  |   |
406 | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | |
. | |
|
|
. | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . |  | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | T | Q | G | V | M | G | M | H | Y | A | R | H | D | G | E | A | E | D | V | A | V | A | L | N | E | . |
Q | . |
. |
. |
Y | Q | P | R | F | A | G | D | D | L | P | S | N | P | V | A | C | A | L | A | I | A | D | K | M |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |
|
|   |   |   |
|
|   |
|
|   |
| . |
| . | . | . |
|   |
|   |   |   |   |
|   |
|
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |   |
|   |
|   |   |   |
|
|   |
|
|
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | A | L | Q | I | E | A | A | K | R | F | G | L | S | A | Q | N | V | L | D | I | C | Q | K | L | Y | E | T | H | K | L | I | T | F | P | R | S | D | C | R | Y | L | P | E | E | H | F | A | G | R | H | A | V | M | N | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| B | S |
| S | S |
|
|
|
|
| B |
| G | G | G | G | G | G |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|