Job Description P00961 Confidence 17.49% Date Wed Jan 25 15:20:10 GMT 2012 Rank 82 Aligned Residues 120 % Identity 21% Template c3memA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative signal transduction protein; PDBTitle: crystal structure of a putative signal transduction protein2 (maqu_0641) from marinobacter aquaeolei vt8 at 2.25 a resolution Resolution 2.25 Å

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		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380					.	.	.	.	.	.	.	.	.	390	.	.														.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	G	T	L	R	D	K	T	D	R	I	Q	A	L	A	G	W	I	A	E	Q	I	G	.	.	.	.	A	D	V	N	H	A	T	R	A	G	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	C	D	L	M	T	N	M	V	F	E	F	T	D	T	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	V	D	Y	W	Q	Q	A	I	W	Q	A	Q	S	A	G	I	L	A	S	X	X	P	R	G	Q	R	P	L	F	G	L	A	Y	L	A	G	L	L	H	N	F	G	H	L	V	L	A	Q	V	F	P	P	H	F	K	L	V	C	R	S	L	E	V	S	P	H	I	D	S	S	V	I	E	H	Y	L	L	G
Template Known Secondary structure		T	S																					S		G	G	G														T	T	T									S															T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
				409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	G	V	M	G	M	H	Y	A	R	H	D	G	E	A	E	D	V	A	V	A	L	N	E	Q	Y	Q	P	R	F	A	G	D	D	L	P	S	N	P	V	A	C	A	L	A	I	A	D	K	M	D	T	L	A	G	I	F	G	I	G	Q	H	P	K	G	D	K	D	P	F	A	L	R	R
Query Conservation		.	.
Alig confidence		.	.																																	.	.	.															.	.	.
Template Conservation																																				.	.	.															.	.	.
Template Sequence		I	T	R	E	Q	I	A	A	Q	L	X	E	N	W	G	X	P	D	E	V	T	L	A	I	R	Y	Q	K	N	P	A	Y	D	G	.	.	.	P	H	N	V	Y	A	R	L	L	W	L	G	R	Q	.	.	.	L	L	T	E	R	G	V	A	L	G	A	G	E	S	A	T	Q	A	V	Y	D	E
Template Known Secondary structure		S													T	T												T	T		T	T			S	.	.	.	T	T													.	.	.					T	T		S	S	S
Template Predicted Secondary structure																																				.	.	.															.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.				.	.	390	.	.	.	.	.	.	.	.	.	400	.				.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions