Job Description P00961 Confidence 33.25% Date Wed Jan 25 15:20:10 GMT 2012 Rank 51 Aligned Residues 90 % Identity 21% Template c3ljvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:mmoq response regulator; PDBTitle: crystal structure of mmoq response regulator (fragment 29-302) from2 methylococcus capsulatus str. bath, northeast structural genomics3 consortium target mcr175m Resolution 2.60 Å

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		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																								.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	D	K	T	D	R	I	Q	A	L	A	G	W	I	A	E	Q	I	G	A	D	V	N	H	A	T	R	A	G	L	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	C	D	L	M	T	N	M	V	F	E	F	T	D	T	Q	G	V	M	G	M	H	Y	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		Y	W	Q	K	S	L	A	R	A	V	A	L	Q	S	I	T	A	Q	A	V	.	A	P	K	E	A	F	T	L	G	L	L	A	D	V	G	R	L	A	L	A	T	A	W	P	E	E	Y	S	E	C	L	R	K	A	D	G	E	A	L	I	A	L	E	R	E	R	F	A	T	D	H	D	E	L	T	R	X	L	L
Template Known Secondary structure															T	T	G	G	G			.												T	T																	T	T	S	S			T												S	S
Template Predicted Secondary structure																						.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	D	G	E	A	E	D	V	A	V	A	L	N	E	Q	Y	Q	P	R	F	A	G	D	D	L	P	S	N	P	V	A	C	A	L	A	I	A	D
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		T	D	W	G	F	P	Q	V	F	I	D	A	L	Q	L	S	Q	Q	T	G	R	F	.	.	.	.	.	A	R	Q	L	A	L	A	Q	H	I	A	D
Template Known Secondary structure				T	T												T	T						.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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