Job Description P00961 Confidence 87.85% Date Wed Jan 25 15:20:10 GMT 2012 Rank 27 Aligned Residues 158 % Identity 21% Template c2ztgA_ PDB info PDB header:ligase Chain: A: PDB Molecule:alanyl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus alanyl-trna2 synthetase lacking the c-terminal dimerization domain in3 complex with ala-sa Resolution 2.20 Å

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		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	E	D	N	L	P	R	L	Q	T	V	L	F	Q	Q	Q	L	G	T	L	R	D	K	T	D	R	I	Q	A	L	A	G	W	I	A	E	Q	I	G	A	D	V	N	H	A	T	R	A	G	L	L	S	K	C	D	L	M	T	N	M	V	F	E	F	T	D	T	Q	G	V	M	G	M	H	Y	A	R	H	D
Query Conservation
Alig confidence																				.	.	.	.																																																								.	.	.
Template Conservation																				.	.	.	.																																																								.	.	.
Template Sequence		E	V	V	D	T	I	I	D	N	S	N	V	S	F	N	R	E	D	.	.	.	.	E	R	V	R	R	I	V	A	E	S	S	K	L	A	G	I	X	G	E	L	R	G	E	R	L	N	Q	L	R	K	S	V	A	D	T	V	G	V	S	V	E	E	L	E	G	I	V	V	P	L	E	K	V	Y	S	.	.	.
Template Known Secondary structure										T	S			S	S		T	T		.	.	.	.																		T	T			T															S	S																		.	.	.
Template Predicted Secondary structure																				.	.	.	.																																																								.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	A	E	D	V	A	V	A	L	N	E	Q	Y	Q	P	R	F	A	G	D	D	L	P	S	N	P	V	A	C	A	L	A	I	A	D	K	M	D	T	L	A	G	I	F	G	I	G	Q	H	P	K	G	D	K	D	P	F	A	L	R	R	A	A	L	G	V	L	R	I	I	V	E	K	N	L	N	L	D	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	D	H	T	R	C	I	L	F	X	L	G	D	G	L	V	P	S	N	A	G	A	G	Y	L	A	R	L	X	I	R	R	S	L	R	L	A	E	E	L	E	L	G	L	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T					S	S																				T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		Q	T	L	T	E	E	A	V	R	L	Y	G	D	K	L	T	N	.	A	N	V	V	D	D	V	I	D	F	M	L	G	R	F	R	A	W	Y	Q	D
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		Y	D	L	V	E	X	H	K	K	I	L	G	F	E	F	D	V	P	L	S	T	V	Q	E	I	L	E	L	E	K	E	R	Y	R	T	T	V	S	K
Template Known Secondary structure																	S	S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions