Job Description P00961 Confidence 23.15% Date Wed Jan 25 15:20:10 GMT 2012 Rank 61 Aligned Residues 56 % Identity 16% Template c2ziiA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 74; PDBTitle: crystal structure of yeast vps74-n-term truncation variant Resolution 3.05 Å

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		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	D	T	L	A	G	I	F	G	I	G	Q	H	P	K	G	D	K	D	P	F	A	L	R	R	A	A	L	G	V	L	R	I	I	V	E	K	N	L	N	L	D	L	Q	T	L	T	E	E	A	V	R	L	Y	G	D	K	L	T	N	A	N	V	V	D	D	V	I	D	F	M
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		R	A	E	E	I	M	A	Q	F	.	.	.	.	.	.	.	.	S	Q	Y	P	F	D	L	E	K	E	T	E	.	.	.	.	.	.	.	.	L	G	V	S	V	N	L	N	K	E	V	K	E	E	I	E	N	N	P	G	H	D	L	Q	L	E	V	I	A	G	V	F	E	V	F
Template Known Secondary structure										T	.	.	.	.	.	.	.	.	S	S	S	S				S				T	.	.	.	.	.	.	.	.	T		S	S	T	T											S	S		S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.									.	.	.	.	.	.	.	.	300	.	.	.									.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions