Return to main results Retrieve Phyre Job Id

Job DescriptionP00961
Confidence18.70%DateWed Jan 25 15:20:10 GMT 2012
Rank73Aligned Residues19
% Identity26%Templatec2kqtC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:m2 protein; PDBTitle: solid-state nmr structure of the m2 transmembrane peptide of the2 influenza a virus in dmpc lipid bilayers bound to deuterated3 amantadine
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   474.....480.........490..
Predicted Secondary structure 


Query SS confidence 


















Query Sequence  DKDPFALRRAALGVLRIIV
Query Conservation 
 






 
 





 
Alig confidence 


















Template Conservation 


















Template Sequence  SSDPLVVAASIIGILHLIL
Template Known Secondary structure 


Template Predicted Secondary structure 



Template SS confidence 


















   22.......30.........40
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions