Job Description P00961 Confidence 38.42% Date Wed Jan 25 15:20:10 GMT 2012 Rank 43 Aligned Residues 97 % Identity 10% Template c1sb7A_ PDB info PDB header:lyase Chain: A: PDB Molecule:trna pseudouridine synthase d; PDBTitle: crystal structure of the e.coli pseudouridine synthase trud Resolution 2.20 Å

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		101	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		T	V	D	Q	A	E	R	L	T	T	D	.	.	.	.	.	.	K	G	E	W	L	L	Y	R	A	H	V	K	G	E	S	T	E	A	L	L	P	N	M	V	A	T	S	L	A	K	L	P	I	P	K	L	M	R	W	G	A	S	D	V	H	F	V	R	P	V	H	T	V	T	L	L	L	G	D	K	V	I	P
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																												.	.				.																					.
Template Conservation																																														.	.				.																					.
Template Sequence		N	P	E	D	F	V	V	V	E	D	L	G	F	E	P	D	G	E	G	E	H	I	L	V	R	I	L	K	N	G	C	N	T	R	F	V	A	D	A	L	A	K	F	L	.	.	K	I	H	.	A	R	E	V	S	F	A	G	Q	K	D	K	H	A	V	T	E	Q	W	L	.	C	A	R	V	P	G	K	E	X
Template Known Secondary structure		S	G	G	G								S	S				S		S	S										S	S													T	.	.	T	S		.	G	G	G				S					T	T	S							.						S	S
Template Predicted Secondary structure																																														.	.				.																					.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	I	L	G	I	Q	S	D	R	V	I	R	G	H	R	F	M	G	E	P	E	F	T	I	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	L	S	A	F	Q	L	E	G	C	Q	V	L	E	Y	A	R	H	K	R	K	L	R	L	G	A
Template Known Secondary structure				T	T	S				T	T										S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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