Job Description P00961 Confidence 97.95% Date Wed Jan 25 15:20:10 GMT 2012 Rank 4 Aligned Residues 166 % Identity 20% Template c1iq0A_ PDB info PDB header:ligase Chain: A: PDB Molecule:arginyl-trna synthetase; PDBTitle: thermus thermophilus arginyl-trna synthetase Resolution 2.30 Å

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		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.						.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.				.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.																													.	.	.
Query SS confidence																						.	.	.	.	.																													.	.	.
Query Sequence		L	D	L	Q	T	L	T	E	E	A	V	R	L	Y	G	D	K	L	T	N	.	.	.	.	.	A	N	V	V	D	D	V	I	D	F	M	L	G	R	F	R	A	W	Y	Q	D	E	G	Y	T	V	D	T	.	.	.	I	Q	A	V	L	A	R	R	P	T	R	P	A	D	F	D	A	R	M	K	A	V	S	H
Query Conservation																						.	.	.	.	.																													.	.	.
Alig confidence																						.	.	.	.	.																													.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	V	D	E	V	L	E	E	A	T	R	R	A	R	A	I	V	E	E	K	N	P	D	H	P	D	K	E	E	A	A	R	M	V	A	L	G	A	I	R	F	S	M	V	K	T	E	P	K	K	Q	I	D	F	R	Y	Q	E	A	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			B																					T	T		S																					S		T	T	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	T	L	D	A	A	A	A	L	A	A	A	N	K	R	V	S	N	I	L	A	K	S	D	E	V	L	S	D	R	V	N	A	S	T	L	K	E	P	E	E	I	K	L	A	M	Q	V	V	V	L	R	D	K	L	E	P	Y	F	T	E	G	R	Y	Q	D	A	L	V	E	L	A	E	L	R	E	P	V	D
Query Conservation
Alig confidence		.																											.	.	.
Template Conservation		.																											.	.	.
Template Sequence		.	F	E	G	D	T	G	P	Y	V	Q	Y	A	H	A	R	A	H	S	I	L	R	K	A	G	E	W	.	.	.	G	A	P	D	L	S	Q	A	T	P	Y	E	R	A	L	A	L	D	L	L	D	F	E	E	A	V	L	E	A	A	E	E	R	T	P	H	V	L	A	Q	Y	L	L	D	L	A	A	S	W	N
Template Known Secondary structure		.	S	S	S	S	S																						.	.	.					G	G	G													T	T												T
Template Predicted Secondary structure		.																											.	.	.
Template SS confidence
			465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490				.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
		650	.	.	.	.	.	.								.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		A	F	F	D	K	V	M	.	.	.	.	.	.	.	V	M	V	D	D	K	E	L	R	I	N	R	L	T	M	L	E	K	L	R	E	L	F	L	R	V	A	D	I
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	Y	N	A	R	E	N	G	Q	P	A	T	P	V	L	T	A	P	E	G	L	R	E	L	R	L	S	L	V	Q	S	L	Q	R	T	L	A	T	G	L	D	L
Template Known Secondary structure									T	T			S	S		S	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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