 |
Job Description | P00961 | Confidence | 27.31% | Date | Wed Jan 25 15:20:10 GMT 2012 |
Rank | 55 | Aligned Residues | 145 |
% Identity | 10% | Template | c1ileA_ |
PDB info |
PDB header:aminoacyl-trna synthetase | Chain: A: PDB Molecule:isoleucyl-trna synthetase; |
PDBTitle: isoleucyl-trna synthetase
|
Resolution | 2.50 Å |
|
 |
  |   |
539 | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | Y | T | V | D | T | I | Q | A | V | L | A | R | R | P | T | R | P | A | D | F | D | A | R | M | K | A | V | S | H | F | R | T | L | D | A | A | A | A | L | A | A | A | N | K | R | V | S | N | I | L | A | K | S | D | E | V | L | S | D | R | V | N | A | S | T | L | K | E | P | E | E | I | K | L | A | M | Q | V |
Query Conservation |   |
  |
|   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   | . |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |
|   |   |
|
|   |   |
|
Template Sequence |   |
R | K | F | G | A | D | A | L | R | W | Y | I | Y | V | S | A | P | P | E | A | D | R | R | F | G | P | N | L | V | R | E | T | V | R | . |
D | Y | F | L | T | L | W | N | V | Y | S | F | F | V | T | Y | A | N | L | D | R | P | D | L | K | N | P | P | P | P | E | K | R | P | . |
E | M | D | R | W | L | L | A | R | M |
Template Known Secondary structure |   |
T | T | T |
|  |  |  |  |  |  |  |  |  |  |  | S |
| S | S | S |
|  |  |
|
|  |  |  |  |  |  |  |  |  | . |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | S |
|
|
| S | T | T | S |
| . |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
| . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
607 | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | |
. | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | |
. | . | . | . | . | 680 | . | . | . | . |
  |
  |   |
619 | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | |
|
. | 650 | . | . | . | . | . | |
|
|
|
. | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
|
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | L | R | D | K | L | E | P | Y | F | T | E | G | R | Y | Q | D | A | L | V | E | L | A | E | L | R | E | P | V | . |
. |
D | A | F | F | D | K | V | . |
. |
. |
. |
M | V | M | V | D | D | K | E | L | R | I | N | R | L | T | M | L | E | K | L | R | E | L | F | L | R | V | A | D | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
| . | . |
|   |
|
|
|   |
| . | . | . | . |
|
|
|   |   |
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|   |
Template Sequence |   |
Q | D | L | I | Q | R | V | T | E | A | L | E | A | Y | D | P | T | T | S | A | R | A | L | R | D | F | V | V | E | D | L | S | Q | W | Y | V | R | R | N | R | R | R | F | W | K | N | E | D | A | L | D | R | E | A | A | Y | A | T | L | Y | E | A | L | V | L | V | A | T | L | A | A | P | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | T | T | T |  |  |  |  |  |  |  |  |  | T |
| T | T | T | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
685 | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|