Return to main results Retrieve Phyre Job Id

Job DescriptionP09126
Confidence87.91%DateThu Jan 5 11:01:52 GMT 2012
Rank16Aligned Residues123
% Identity18%Templated7reqa2
SCOP infoFlavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.. .......140.........150.........160.........170.........180......
Predicted Secondary structure 





.....






















..
Query SS confidence 


















. . . . .





















































. .
Query Sequence  VLLQLPELQNIAGKRALIL. . . . . RGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTS. .
Query Conservation   
             

  ..... 
      
   
   
  
     
               
     
 
 


..
Alig confidence 


















.....


























......




















..
Template Conservation            
 






  
 
 
  
   

  
   
 


 

   ......
 
     
    



 

   
Template Sequence  ELVEEFEQAEGRRPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQ. . . . . . TPEETARQAVEADVHVVGVSSLA
Template Known Secondary structure  SS


BTT



TT


TTB......
T
S
S
Template Predicted Secondary structure 














......







Template SS confidence 















































































   585....590.........600.........610.........620.........630..... ....640.........650........
 
   187..190.........200.........210..... ....220.........230.........240......
Predicted Secondary structure  ...





...










Query SS confidence  . . .




























. . .






























Query Sequence  . . . GEMLQQLWSLIPQWYREHWLLHCRLLVVS. . . ERLAKLARELGWQDIKVADNADNDALLRALQ
Query Conservation  ...   
               
    




...  

  
   
     

  
    

 

 
Alig confidence  ...
















....







...






























Template Conservation           
   

  
  .... 
 
  

       
 
   


     
         
  
Template Sequence  GGHLTLVPALRKELDKLGRP. . . . DILITVGGVIPEQDFDELRKDGAVEIYTPGTVIPESAISLVK
Template Known Secondary structure  S
TT
T....TSS

GGGT
TT

Template Predicted Secondary structure 





....















Template SS confidence 

































































   659660.........670........ .680.........690.........700.........710.........720
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions