Return to main results Retrieve Phyre Job Id

Job DescriptionP09126
Confidence79.02%DateThu Jan 5 11:01:52 GMT 2012
Rank29Aligned Residues101
% Identity14%Templated1ccwa_
SCOP infoFlavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180...... ...190.........200.........
Predicted Secondary structure 




















.....




Query SS confidence 



















































. . . . .






















Query Sequence  NGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTS. . . . . GEMLQQLWSLIPQWYREHWLLHC
Query Conservation        
   
   
  
     
               
     
 
 


.....   
               
   
Alig confidence 






















......






















.....
















....

Template Conservation   

   
   
   
  
  

 ......    
           
 
 

            

  

     ....  
Template Sequence  AVGNKILDHAFTNAGFNVVNIGV. . . . . . LSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLE. . . . GI
Template Known Secondary structure 
TT
......
T
S
SSTTTTT
T....T
Template Predicted Secondary structure 





......
















....

Template SS confidence 















































































   17..20.........30......... 40.........50.........60.........70.........80.... ..
 
   210..... ....220.........230.........240......
Predicted Secondary structure 
.........










Query SS confidence 





. . . . . . . . .






























Query Sequence  RLLVVS. . . . . . . . . ERLAKLARELGWQDIKVADNADNDALLRALQ
Query Conservation   




.........  

  
   
     

  
    

 

 
Alig confidence 





.........















.













Template Conservation   
 


               
   
 
 

.  
   
     

Template Sequence  LLYVGGNIVVGKQHWPDVEKRFKDMGYDRVY. APGTPPEVGIADLK
Template Known Secondary structure  S
SSSS

TT
S
.
TT

Template Predicted Secondary structure 













.




Template SS confidence 













































   87..90.........100.........110....... ..120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions