Job Description P09126 Confidence 74.65% Date Thu Jan 5 11:01:52 GMT 2012 Rank 42 Aligned Residues 170 % Identity 15% Template c3pdiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.												.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	A	G	E	E	L	V	S	R	L	R	T	L	G	Q	V	A	W	H	F	P	L	I	.	.	.	.	.	.	.	.	.	.	.	E	F	S	P	G	Q	Q	L	P	Q	L	A	D	Q	L	A	A	L	G	E	S	D	L	L	F	A	L	S	Q	H	A	V	A	F	A	Q	S	Q	L	H	Q	Q	D	R	K
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																																													.
Template Conservation																																																																																	.
Template Sequence		P	G	D	L	E	Y	I	A	E	S	I	E	S	F	G	L	R	P	L	L	I	P	D	L	S	G	S	L	D	G	H	L	D	E	N	R	F	N	A	L	T	T	G	G	L	S	V	A	E	L	A	T	A	G	Q	S	V	A	T	L	V	V	G	Q	S	L	A	G	A	A	D	A	L	A	E	R	T	G	V	.
Template Known Secondary structure														T	T	T							S						S	S	S				S	S			T	T			S		S	B						G	G	G	S	S		S						S	G	G	G											S			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		78	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.					.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.										.	.	.	.						.	.
Query SS confidence														.	.	.	.	.										.	.	.	.						.	.
Query Sequence		W	P	R	L	P	D	Y	F	A	I	G	R	.	.	.	.	.	T	T	A	L	A	L	H	T	V	.	.	.	.	S	G	Q	K	I	.	.	L	Y	P	Q	D	R	E	I	S	E	V	L	L	Q	L	P	E	L	Q	N	I	A	G	K	R	A	L	I	L	R	G	N	G	G	R	E	L	I	G	D	T	L	T
Query Conservation														.	.	.	.	.										.	.	.	.						.	.
Alig confidence		.	.	.	.	.								.	.	.	.	.										.	.	.	.						.	.																	.	.
Template Conservation		.	.	.	.	.																																																	.	.
Template Sequence		.	.	.	.	.	P	D	R	R	F	G	M	L	Y	G	L	D	A	V	D	A	W	L	M	A	L	A	E	I	S	G	N	P	V	P	D	R	Y	K	R	Q	R	A	Q	L	Q	D	A	M	L	D	T	H	.	.	F	M	L	S	S	A	R	T	A	I	A	A	D	P	D	L	L	L	G	F	D	A	L	L	R
Template Known Secondary structure		.	.	.	.	.								S																		S	S																						.	.				T	T
Template Predicted Secondary structure		.	.	.	.	.																																																	.	.
Template SS confidence
							261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.											.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	G	A	E	V	T	F	C	E	C	Y	Q	R	C	A	I	H	Y	D	G	.	.	.	.	.	.	.	.	.	.	A	E	E	A	M	R	W	Q	A	R	E	V	T	M	V	V	V	T	S
Query Conservation																							.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	M	G	A	H	T	V	A	A	V	V	P	A	R	A	A	A	L	V	D	S	P	L	P	S	V	R	V	G	D	L	E	D	L	E	H	A	A	R	A	G	Q	A	Q	L	V	I	G	N	S
Template Known Secondary structure		T	T	T									S	S			S			T	T	T	T	S	S					S													T		S						T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions